Gene : AL3G21720 A. lyrata v2.1

Defline:  (1 of 1) PTHR10742:SF260 - LYSINE-SPECIFIC HISTONE DEMETHYLASE 1 HOMOLOG 3 Genomic Order:  1114
Name:  ? AL3G21720 Secondary Identifier:  ? PAC:35943334

Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Alyrata PWY-6441 Arabidopsis lyrata pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AL3G21720 0.5kb upstream 0.5kb upstream 3930   true scaffold_3: 4150464-4154393 Arabidopsis lyrata
AL3G21720 0.5kb upstream 0.5kb upstream 500   false scaffold_3: 4150464-4150963 Arabidopsis lyrata
AL3G21720 0.5kb downstream 0.5kb downstream 3930   true scaffold_3: 4150964-4154893 Arabidopsis lyrata
AL3G21720 0.5kb downstream 0.5kb downstream 500   false scaffold_3: 4154394-4154893 Arabidopsis lyrata
AL3G21720 1.0kb upstream 1.0kb upstream 4430   true scaffold_3: 4149964-4154393 Arabidopsis lyrata
AL3G21720 1.0kb upstream 1.0kb upstream 1000   false scaffold_3: 4149964-4150963 Arabidopsis lyrata
AL3G21720 1.0kb downstream 1.0kb downstream 4430   true scaffold_3: 4150964-4155393 Arabidopsis lyrata
AL3G21720 1.0kb downstream 1.0kb downstream 1000   false scaffold_3: 4154394-4155393 Arabidopsis lyrata
AL3G21720 2.0kb upstream 2.0kb upstream 5430   true scaffold_3: 4148964-4154393 Arabidopsis lyrata
AL3G21720 2.0kb upstream 2.0kb upstream 2000   false scaffold_3: 4148964-4150963 Arabidopsis lyrata
AL3G21720 2.0kb downstream 2.0kb downstream 5430   true scaffold_3: 4150964-4156393 Arabidopsis lyrata
AL3G21720 2.0kb downstream 2.0kb downstream 2000   false scaffold_3: 4154394-4156393 Arabidopsis lyrata
AL3G21720 5.0kb upstream 5.0kb upstream 8430   true scaffold_3: 4145964-4154393 Arabidopsis lyrata
AL3G21720 5.0kb upstream 5.0kb upstream 5000   false scaffold_3: 4145964-4150963 Arabidopsis lyrata
AL3G21720 5.0kb downstream 5.0kb downstream 8430   true scaffold_3: 4150964-4159393 Arabidopsis lyrata
AL3G21720 5.0kb downstream 5.0kb downstream 5000   false scaffold_3: 4154394-4159393 Arabidopsis lyrata
AL3G21720 10.0kb upstream 10.0kb upstream 13430   true scaffold_3: 4140964-4154393 Arabidopsis lyrata
AL3G21720 10.0kb upstream 10.0kb upstream 10000   false scaffold_3: 4140964-4150963 Arabidopsis lyrata
AL3G21720 10.0kb downstream 10.0kb downstream 13430   true scaffold_3: 4150964-4164393 Arabidopsis lyrata
AL3G21720 10.0kb downstream 10.0kb downstream 10000   false scaffold_3: 4154394-4164393 Arabidopsis lyrata

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122362933 5261 Brassicaceae View MSA
123830834 5264 Brassicales-Malvales View MSA
124341216 5266 SBM View MSA
124237182 5268 Malvidae View MSA
124068541 5270 Rosid View MSA
123736657 5271 Pentapetalae View MSA
122791898 5272 Eudicot View MSA
122046966 5273 Angiosperm View MSA
121350960 5274 Embryophyte View MSA
123428250 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain