Gene : AL3G21800 A. lyrata v2.1
Defline:  (1 of 2) PTHR34373:SF2 - SHUGOSHIN C TERMINUS Genomic Order:  1120
Name:  ? AL3G21800 Secondary Identifier:  ? PAC:35941172
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3 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AL3G21800 0.5kb upstream 0.5kb upstream 4433   true scaffold_3: 4168574-4173006 Arabidopsis lyrata
AL3G21800 0.5kb upstream 0.5kb upstream 500   false scaffold_3: 4168574-4169073 Arabidopsis lyrata
AL3G21800 0.5kb downstream 0.5kb downstream 4433   true scaffold_3: 4169074-4173506 Arabidopsis lyrata
AL3G21800 0.5kb downstream 0.5kb downstream 500   false scaffold_3: 4173007-4173506 Arabidopsis lyrata
AL3G21800 1.0kb upstream 1.0kb upstream 4933   true scaffold_3: 4168074-4173006 Arabidopsis lyrata
AL3G21800 1.0kb upstream 1.0kb upstream 1000   false scaffold_3: 4168074-4169073 Arabidopsis lyrata
AL3G21800 1.0kb downstream 1.0kb downstream 4933   true scaffold_3: 4169074-4174006 Arabidopsis lyrata
AL3G21800 1.0kb downstream 1.0kb downstream 1000   false scaffold_3: 4173007-4174006 Arabidopsis lyrata
AL3G21800 2.0kb upstream 2.0kb upstream 5933   true scaffold_3: 4167074-4173006 Arabidopsis lyrata
AL3G21800 2.0kb upstream 2.0kb upstream 2000   false scaffold_3: 4167074-4169073 Arabidopsis lyrata
AL3G21800 2.0kb downstream 2.0kb downstream 5933   true scaffold_3: 4169074-4175006 Arabidopsis lyrata
AL3G21800 2.0kb downstream 2.0kb downstream 2000   false scaffold_3: 4173007-4175006 Arabidopsis lyrata
AL3G21800 5.0kb upstream 5.0kb upstream 8933   true scaffold_3: 4164074-4173006 Arabidopsis lyrata
AL3G21800 5.0kb upstream 5.0kb upstream 5000   false scaffold_3: 4164074-4169073 Arabidopsis lyrata
AL3G21800 5.0kb downstream 5.0kb downstream 8933   true scaffold_3: 4169074-4178006 Arabidopsis lyrata
AL3G21800 5.0kb downstream 5.0kb downstream 5000   false scaffold_3: 4173007-4178006 Arabidopsis lyrata
AL3G21800 10.0kb upstream 10.0kb upstream 13933   true scaffold_3: 4159074-4173006 Arabidopsis lyrata
AL3G21800 10.0kb upstream 10.0kb upstream 10000   false scaffold_3: 4159074-4169073 Arabidopsis lyrata
AL3G21800 10.0kb downstream 10.0kb downstream 13933   true scaffold_3: 4169074-4183006 Arabidopsis lyrata
AL3G21800 10.0kb downstream 10.0kb downstream 10000   false scaffold_3: 4173007-4183006 Arabidopsis lyrata

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122028020 5273 Angiosperm View MSA
122380773 5261 Brassicaceae View MSA
123838720 5264 Brassicales-Malvales View MSA
124322493 5266 SBM View MSA
124250251 5268 Malvidae View MSA
124074097 5270 Rosid View MSA
123746067 5271 Pentapetalae View MSA
122795330 5272 Eudicot View MSA
121349389 5274 Embryophyte View MSA
123381292 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain