Gene : AL3G21180 A. lyrata v2.1

Defline:  (1 of 1) PTHR23086:SF42 - PHOSPHATIDYLINOSITOL 4-PHOSPHATE 5-KINASE 9 Genomic Order:  1063
Name:  ? AL3G21180 Secondary Identifier:  ? PAC:35943781

Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Alyrata PWY-6351 Arabidopsis lyrata pathologic  
Alyrata PWY-6352 Arabidopsis lyrata pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AL3G21180 0.5kb upstream 0.5kb upstream 5228   true scaffold_3: 3919411-3924638 Arabidopsis lyrata
AL3G21180 0.5kb upstream 0.5kb upstream 500   false scaffold_3: 3924139-3924638 Arabidopsis lyrata
AL3G21180 0.5kb downstream 0.5kb downstream 5228   true scaffold_3: 3918911-3924138 Arabidopsis lyrata
AL3G21180 0.5kb downstream 0.5kb downstream 500   false scaffold_3: 3918911-3919410 Arabidopsis lyrata
AL3G21180 1.0kb upstream 1.0kb upstream 5728   true scaffold_3: 3919411-3925138 Arabidopsis lyrata
AL3G21180 1.0kb upstream 1.0kb upstream 1000   false scaffold_3: 3924139-3925138 Arabidopsis lyrata
AL3G21180 1.0kb downstream 1.0kb downstream 5728   true scaffold_3: 3918411-3924138 Arabidopsis lyrata
AL3G21180 1.0kb downstream 1.0kb downstream 1000   false scaffold_3: 3918411-3919410 Arabidopsis lyrata
AL3G21180 2.0kb upstream 2.0kb upstream 6728   true scaffold_3: 3919411-3926138 Arabidopsis lyrata
AL3G21180 2.0kb upstream 2.0kb upstream 2000   false scaffold_3: 3924139-3926138 Arabidopsis lyrata
AL3G21180 2.0kb downstream 2.0kb downstream 6728   true scaffold_3: 3917411-3924138 Arabidopsis lyrata
AL3G21180 2.0kb downstream 2.0kb downstream 2000   false scaffold_3: 3917411-3919410 Arabidopsis lyrata
AL3G21180 5.0kb upstream 5.0kb upstream 9728   true scaffold_3: 3919411-3929138 Arabidopsis lyrata
AL3G21180 5.0kb upstream 5.0kb upstream 5000   false scaffold_3: 3924139-3929138 Arabidopsis lyrata
AL3G21180 5.0kb downstream 5.0kb downstream 9728   true scaffold_3: 3914411-3924138 Arabidopsis lyrata
AL3G21180 5.0kb downstream 5.0kb downstream 5000   false scaffold_3: 3914411-3919410 Arabidopsis lyrata
AL3G21180 10.0kb upstream 10.0kb upstream 14728   true scaffold_3: 3919411-3934138 Arabidopsis lyrata
AL3G21180 10.0kb upstream 10.0kb upstream 10000   false scaffold_3: 3924139-3934138 Arabidopsis lyrata
AL3G21180 10.0kb downstream 10.0kb downstream 14728   true scaffold_3: 3909411-3924138 Arabidopsis lyrata
AL3G21180 10.0kb downstream 10.0kb downstream 10000   false scaffold_3: 3909411-3919410 Arabidopsis lyrata

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122026416 5273 Angiosperm View MSA
122366855 5261 Brassicaceae View MSA
123828131 5264 Brassicales-Malvales View MSA
124340268 5266 SBM View MSA
124241135 5268 Malvidae View MSA
124066368 5270 Rosid View MSA
123738623 5271 Pentapetalae View MSA
122790616 5272 Eudicot View MSA
121350823 5274 Embryophyte View MSA
123428791 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain