Gene : AL3G21390 A. lyrata v2.1

Defline:  (1 of 2) PTHR10516:SF323 - PEPTIDYL-PROLYL CIS-TRANS ISOMERASE FKBP16-4, CHLOROPLASTIC Genomic Order:  1081
Name:  ? AL3G21390 Secondary Identifier:  ? PAC:35942894

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AL3G21390 0.5kb upstream 0.5kb upstream 2474   true scaffold_3: 4015167-4017640 Arabidopsis lyrata
AL3G21390 0.5kb upstream 0.5kb upstream 500   false scaffold_3: 4015167-4015666 Arabidopsis lyrata
AL3G21390 0.5kb downstream 0.5kb downstream 2474   true scaffold_3: 4015667-4018140 Arabidopsis lyrata
AL3G21390 0.5kb downstream 0.5kb downstream 500   false scaffold_3: 4017641-4018140 Arabidopsis lyrata
AL3G21390 1.0kb upstream 1.0kb upstream 2974   true scaffold_3: 4014667-4017640 Arabidopsis lyrata
AL3G21390 1.0kb upstream 1.0kb upstream 1000   false scaffold_3: 4014667-4015666 Arabidopsis lyrata
AL3G21390 1.0kb downstream 1.0kb downstream 2974   true scaffold_3: 4015667-4018640 Arabidopsis lyrata
AL3G21390 1.0kb downstream 1.0kb downstream 1000   false scaffold_3: 4017641-4018640 Arabidopsis lyrata
AL3G21390 2.0kb upstream 2.0kb upstream 3974   true scaffold_3: 4013667-4017640 Arabidopsis lyrata
AL3G21390 2.0kb upstream 2.0kb upstream 2000   false scaffold_3: 4013667-4015666 Arabidopsis lyrata
AL3G21390 2.0kb downstream 2.0kb downstream 3974   true scaffold_3: 4015667-4019640 Arabidopsis lyrata
AL3G21390 2.0kb downstream 2.0kb downstream 2000   false scaffold_3: 4017641-4019640 Arabidopsis lyrata
AL3G21390 5.0kb upstream 5.0kb upstream 6974   true scaffold_3: 4010667-4017640 Arabidopsis lyrata
AL3G21390 5.0kb upstream 5.0kb upstream 5000   false scaffold_3: 4010667-4015666 Arabidopsis lyrata
AL3G21390 5.0kb downstream 5.0kb downstream 6974   true scaffold_3: 4015667-4022640 Arabidopsis lyrata
AL3G21390 5.0kb downstream 5.0kb downstream 5000   false scaffold_3: 4017641-4022640 Arabidopsis lyrata
AL3G21390 10.0kb upstream 10.0kb upstream 11974   true scaffold_3: 4005667-4017640 Arabidopsis lyrata
AL3G21390 10.0kb upstream 10.0kb upstream 10000   false scaffold_3: 4005667-4015666 Arabidopsis lyrata
AL3G21390 10.0kb downstream 10.0kb downstream 11974   true scaffold_3: 4015667-4027640 Arabidopsis lyrata
AL3G21390 10.0kb downstream 10.0kb downstream 10000   false scaffold_3: 4017641-4027640 Arabidopsis lyrata

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122363764 5261 Brassicaceae View MSA
123833940 5264 Brassicales-Malvales View MSA
124340496 5266 SBM View MSA
124243766 5268 Malvidae View MSA
124067808 5270 Rosid View MSA
123739140 5271 Pentapetalae View MSA
122789715 5272 Eudicot View MSA
122047371 5273 Angiosperm View MSA
121347263 5274 Embryophyte View MSA
123426566 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain