Gene : AL3G21490 A. lyrata v2.1

Defline:  (1 of 4) 6.3.2.17 - Tetrahydrofolate synthase / Tetrahydrofolylpolyglutamate synthase Genomic Order:  1091
Name:  ? AL3G21490 Secondary Identifier:  ? PAC:35941691

Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Alyrata PWY-2161 Arabidopsis lyrata pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AL3G21490 0.5kb upstream 0.5kb upstream 5815   true scaffold_3: 4050038-4055852 Arabidopsis lyrata
AL3G21490 0.5kb upstream 0.5kb upstream 500   false scaffold_3: 4055353-4055852 Arabidopsis lyrata
AL3G21490 0.5kb downstream 0.5kb downstream 5815   true scaffold_3: 4049538-4055352 Arabidopsis lyrata
AL3G21490 0.5kb downstream 0.5kb downstream 500   false scaffold_3: 4049538-4050037 Arabidopsis lyrata
AL3G21490 1.0kb upstream 1.0kb upstream 6315   true scaffold_3: 4050038-4056352 Arabidopsis lyrata
AL3G21490 1.0kb upstream 1.0kb upstream 1000   false scaffold_3: 4055353-4056352 Arabidopsis lyrata
AL3G21490 1.0kb downstream 1.0kb downstream 6315   true scaffold_3: 4049038-4055352 Arabidopsis lyrata
AL3G21490 1.0kb downstream 1.0kb downstream 1000   false scaffold_3: 4049038-4050037 Arabidopsis lyrata
AL3G21490 2.0kb upstream 2.0kb upstream 7315   true scaffold_3: 4050038-4057352 Arabidopsis lyrata
AL3G21490 2.0kb upstream 2.0kb upstream 2000   false scaffold_3: 4055353-4057352 Arabidopsis lyrata
AL3G21490 2.0kb downstream 2.0kb downstream 7315   true scaffold_3: 4048038-4055352 Arabidopsis lyrata
AL3G21490 2.0kb downstream 2.0kb downstream 2000   false scaffold_3: 4048038-4050037 Arabidopsis lyrata
AL3G21490 5.0kb upstream 5.0kb upstream 10315   true scaffold_3: 4050038-4060352 Arabidopsis lyrata
AL3G21490 5.0kb upstream 5.0kb upstream 5000   false scaffold_3: 4055353-4060352 Arabidopsis lyrata
AL3G21490 5.0kb downstream 5.0kb downstream 10315   true scaffold_3: 4045038-4055352 Arabidopsis lyrata
AL3G21490 5.0kb downstream 5.0kb downstream 5000   false scaffold_3: 4045038-4050037 Arabidopsis lyrata
AL3G21490 10.0kb upstream 10.0kb upstream 15315   true scaffold_3: 4050038-4065352 Arabidopsis lyrata
AL3G21490 10.0kb upstream 10.0kb upstream 10000   false scaffold_3: 4055353-4065352 Arabidopsis lyrata
AL3G21490 10.0kb downstream 10.0kb downstream 15315   true scaffold_3: 4040038-4055352 Arabidopsis lyrata
AL3G21490 10.0kb downstream 10.0kb downstream 10000   false scaffold_3: 4040038-4050037 Arabidopsis lyrata

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122362610 5261 Brassicaceae View MSA
123828594 5264 Brassicales-Malvales View MSA
124340906 5266 SBM View MSA
124248831 5268 Malvidae View MSA
124068713 5270 Rosid View MSA
123740446 5271 Pentapetalae View MSA
122786147 5272 Eudicot View MSA
122044962 5273 Angiosperm View MSA
121349297 5274 Embryophyte View MSA
123426614 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain