Gene : AL3G20370 A. lyrata v2.1

Defline:  (1 of 36) K01188 - beta-glucosidase (E3.2.1.21) Genomic Order:  989
Name:  ? AL3G20370 Secondary Identifier:  ? PAC:35943703

Sequence Feature Displayer

Ontology Annotation Displayer

4 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Alyrata PWY-5176 Arabidopsis lyrata pathologic  
Alyrata PWY-7089 Arabidopsis lyrata pathologic  
Alyrata PWY-7091 Arabidopsis lyrata pathologic  
Alyrata PWY-7092 Arabidopsis lyrata pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AL3G20370 0.5kb upstream 0.5kb upstream 4671   true scaffold_3: 3669279-3673949 Arabidopsis lyrata
AL3G20370 0.5kb upstream 0.5kb upstream 500   false scaffold_3: 3673450-3673949 Arabidopsis lyrata
AL3G20370 0.5kb downstream 0.5kb downstream 4671   true scaffold_3: 3668779-3673449 Arabidopsis lyrata
AL3G20370 0.5kb downstream 0.5kb downstream 500   false scaffold_3: 3668779-3669278 Arabidopsis lyrata
AL3G20370 1.0kb upstream 1.0kb upstream 5171   true scaffold_3: 3669279-3674449 Arabidopsis lyrata
AL3G20370 1.0kb upstream 1.0kb upstream 1000   false scaffold_3: 3673450-3674449 Arabidopsis lyrata
AL3G20370 1.0kb downstream 1.0kb downstream 5171   true scaffold_3: 3668279-3673449 Arabidopsis lyrata
AL3G20370 1.0kb downstream 1.0kb downstream 1000   false scaffold_3: 3668279-3669278 Arabidopsis lyrata
AL3G20370 2.0kb upstream 2.0kb upstream 6171   true scaffold_3: 3669279-3675449 Arabidopsis lyrata
AL3G20370 2.0kb upstream 2.0kb upstream 2000   false scaffold_3: 3673450-3675449 Arabidopsis lyrata
AL3G20370 2.0kb downstream 2.0kb downstream 6171   true scaffold_3: 3667279-3673449 Arabidopsis lyrata
AL3G20370 2.0kb downstream 2.0kb downstream 2000   false scaffold_3: 3667279-3669278 Arabidopsis lyrata
AL3G20370 5.0kb upstream 5.0kb upstream 9171   true scaffold_3: 3669279-3678449 Arabidopsis lyrata
AL3G20370 5.0kb upstream 5.0kb upstream 5000   false scaffold_3: 3673450-3678449 Arabidopsis lyrata
AL3G20370 5.0kb downstream 5.0kb downstream 9171   true scaffold_3: 3664279-3673449 Arabidopsis lyrata
AL3G20370 5.0kb downstream 5.0kb downstream 5000   false scaffold_3: 3664279-3669278 Arabidopsis lyrata
AL3G20370 10.0kb upstream 10.0kb upstream 14171   true scaffold_3: 3669279-3683449 Arabidopsis lyrata
AL3G20370 10.0kb upstream 10.0kb upstream 10000   false scaffold_3: 3673450-3683449 Arabidopsis lyrata
AL3G20370 10.0kb downstream 10.0kb downstream 14171   true scaffold_3: 3659279-3673449 Arabidopsis lyrata
AL3G20370 10.0kb downstream 10.0kb downstream 10000   false scaffold_3: 3659279-3669278 Arabidopsis lyrata

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121784895 5273 Angiosperm View MSA
122377592 5261 Brassicaceae View MSA
123801574 5264 Brassicales-Malvales View MSA
124298860 5266 SBM View MSA
124255720 5268 Malvidae View MSA
123953271 5270 Rosid View MSA
123757098 5271 Pentapetalae View MSA
122778172 5272 Eudicot View MSA
121056296 5274 Embryophyte View MSA
123428830 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain