Gene : AL3G20310 A. lyrata v2.1

Defline:  (1 of 3) K02941 - large subunit ribosomal protein LP0 (RP-LP0, RPLP0) Genomic Order:  983
Name:  ? AL3G20310 Secondary Identifier:  ? PAC:35944436

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Ontology Annotation Displayer

0 Pathways

Genomics

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Gene Structure Displayer

Expression

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20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AL3G20310 0.5kb upstream 0.5kb upstream 2285   true scaffold_3: 3648025-3650309 Arabidopsis lyrata
AL3G20310 0.5kb upstream 0.5kb upstream 500   false scaffold_3: 3649810-3650309 Arabidopsis lyrata
AL3G20310 0.5kb downstream 0.5kb downstream 2285   true scaffold_3: 3647525-3649809 Arabidopsis lyrata
AL3G20310 0.5kb downstream 0.5kb downstream 500   false scaffold_3: 3647525-3648024 Arabidopsis lyrata
AL3G20310 1.0kb upstream 1.0kb upstream 2785   true scaffold_3: 3648025-3650809 Arabidopsis lyrata
AL3G20310 1.0kb upstream 1.0kb upstream 1000   false scaffold_3: 3649810-3650809 Arabidopsis lyrata
AL3G20310 1.0kb downstream 1.0kb downstream 2785   true scaffold_3: 3647025-3649809 Arabidopsis lyrata
AL3G20310 1.0kb downstream 1.0kb downstream 1000   false scaffold_3: 3647025-3648024 Arabidopsis lyrata
AL3G20310 2.0kb upstream 2.0kb upstream 3785   true scaffold_3: 3648025-3651809 Arabidopsis lyrata
AL3G20310 2.0kb upstream 2.0kb upstream 2000   false scaffold_3: 3649810-3651809 Arabidopsis lyrata
AL3G20310 2.0kb downstream 2.0kb downstream 3785   true scaffold_3: 3646025-3649809 Arabidopsis lyrata
AL3G20310 2.0kb downstream 2.0kb downstream 2000   false scaffold_3: 3646025-3648024 Arabidopsis lyrata
AL3G20310 5.0kb upstream 5.0kb upstream 6785   true scaffold_3: 3648025-3654809 Arabidopsis lyrata
AL3G20310 5.0kb upstream 5.0kb upstream 5000   false scaffold_3: 3649810-3654809 Arabidopsis lyrata
AL3G20310 5.0kb downstream 5.0kb downstream 6785   true scaffold_3: 3643025-3649809 Arabidopsis lyrata
AL3G20310 5.0kb downstream 5.0kb downstream 5000   false scaffold_3: 3643025-3648024 Arabidopsis lyrata
AL3G20310 10.0kb upstream 10.0kb upstream 11785   true scaffold_3: 3648025-3659809 Arabidopsis lyrata
AL3G20310 10.0kb upstream 10.0kb upstream 10000   false scaffold_3: 3649810-3659809 Arabidopsis lyrata
AL3G20310 10.0kb downstream 10.0kb downstream 11785   true scaffold_3: 3638025-3649809 Arabidopsis lyrata
AL3G20310 10.0kb downstream 10.0kb downstream 10000   false scaffold_3: 3638025-3648024 Arabidopsis lyrata

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122378301 5261 Brassicaceae View MSA
123836746 5264 Brassicales-Malvales View MSA
124342925 5266 SBM View MSA
124243369 5268 Malvidae View MSA
124061567 5270 Rosid View MSA
123747108 5271 Pentapetalae View MSA
122786385 5272 Eudicot View MSA
122042027 5273 Angiosperm View MSA
121345246 5274 Embryophyte View MSA
123428323 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain