Gene : AL3G19840 A. lyrata v2.1

Defline:  (1 of 2) K07204 - regulatory associated protein of mTOR (RAPTOR) Genomic Order:  937
Name:  ? AL3G19840 Secondary Identifier:  ? PAC:35940426

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AL3G19840 0.5kb upstream 0.5kb upstream 9212   true scaffold_3: 3486820-3496031 Arabidopsis lyrata
AL3G19840 0.5kb upstream 0.5kb upstream 500   false scaffold_3: 3495532-3496031 Arabidopsis lyrata
AL3G19840 0.5kb downstream 0.5kb downstream 9212   true scaffold_3: 3486320-3495531 Arabidopsis lyrata
AL3G19840 0.5kb downstream 0.5kb downstream 500   false scaffold_3: 3486320-3486819 Arabidopsis lyrata
AL3G19840 1.0kb upstream 1.0kb upstream 9712   true scaffold_3: 3486820-3496531 Arabidopsis lyrata
AL3G19840 1.0kb upstream 1.0kb upstream 1000   false scaffold_3: 3495532-3496531 Arabidopsis lyrata
AL3G19840 1.0kb downstream 1.0kb downstream 9712   true scaffold_3: 3485820-3495531 Arabidopsis lyrata
AL3G19840 1.0kb downstream 1.0kb downstream 1000   false scaffold_3: 3485820-3486819 Arabidopsis lyrata
AL3G19840 2.0kb upstream 2.0kb upstream 10712   true scaffold_3: 3486820-3497531 Arabidopsis lyrata
AL3G19840 2.0kb upstream 2.0kb upstream 2000   false scaffold_3: 3495532-3497531 Arabidopsis lyrata
AL3G19840 2.0kb downstream 2.0kb downstream 10712   true scaffold_3: 3484820-3495531 Arabidopsis lyrata
AL3G19840 2.0kb downstream 2.0kb downstream 2000   false scaffold_3: 3484820-3486819 Arabidopsis lyrata
AL3G19840 5.0kb upstream 5.0kb upstream 13712   true scaffold_3: 3486820-3500531 Arabidopsis lyrata
AL3G19840 5.0kb upstream 5.0kb upstream 5000   false scaffold_3: 3495532-3500531 Arabidopsis lyrata
AL3G19840 5.0kb downstream 5.0kb downstream 13712   true scaffold_3: 3481820-3495531 Arabidopsis lyrata
AL3G19840 5.0kb downstream 5.0kb downstream 5000   false scaffold_3: 3481820-3486819 Arabidopsis lyrata
AL3G19840 10.0kb upstream 10.0kb upstream 18712   true scaffold_3: 3486820-3505531 Arabidopsis lyrata
AL3G19840 10.0kb upstream 10.0kb upstream 10000   false scaffold_3: 3495532-3505531 Arabidopsis lyrata
AL3G19840 10.0kb downstream 10.0kb downstream 18712   true scaffold_3: 3476820-3495531 Arabidopsis lyrata
AL3G19840 10.0kb downstream 10.0kb downstream 10000   false scaffold_3: 3476820-3486819 Arabidopsis lyrata

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122373648 5261 Brassicaceae View MSA
123828094 5264 Brassicales-Malvales View MSA
124345786 5266 SBM View MSA
124238592 5268 Malvidae View MSA
124067710 5270 Rosid View MSA
123738881 5271 Pentapetalae View MSA
122797949 5272 Eudicot View MSA
122045777 5273 Angiosperm View MSA
121349402 5274 Embryophyte View MSA
123426169 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain