Gene : AL3G23970 A. lyrata v2.1

Defline:  (1 of 2) PTHR33334:SF2 - GENOMIC DNA, CHROMOSOME 3, P1 CLONE: MQC3 Genomic Order:  1325
Name:  ? AL3G23970 Secondary Identifier:  ? PAC:35942467

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

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20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AL3G23970 0.5kb upstream 0.5kb upstream 2281   true scaffold_3: 4958784-4961064 Arabidopsis lyrata
AL3G23970 0.5kb upstream 0.5kb upstream 500   false scaffold_3: 4958784-4959283 Arabidopsis lyrata
AL3G23970 0.5kb downstream 0.5kb downstream 2281   true scaffold_3: 4959284-4961564 Arabidopsis lyrata
AL3G23970 0.5kb downstream 0.5kb downstream 500   false scaffold_3: 4961065-4961564 Arabidopsis lyrata
AL3G23970 1.0kb upstream 1.0kb upstream 2781   true scaffold_3: 4958284-4961064 Arabidopsis lyrata
AL3G23970 1.0kb upstream 1.0kb upstream 1000   false scaffold_3: 4958284-4959283 Arabidopsis lyrata
AL3G23970 1.0kb downstream 1.0kb downstream 2781   true scaffold_3: 4959284-4962064 Arabidopsis lyrata
AL3G23970 1.0kb downstream 1.0kb downstream 1000   false scaffold_3: 4961065-4962064 Arabidopsis lyrata
AL3G23970 2.0kb upstream 2.0kb upstream 3781   true scaffold_3: 4957284-4961064 Arabidopsis lyrata
AL3G23970 2.0kb upstream 2.0kb upstream 2000   false scaffold_3: 4957284-4959283 Arabidopsis lyrata
AL3G23970 2.0kb downstream 2.0kb downstream 3781   true scaffold_3: 4959284-4963064 Arabidopsis lyrata
AL3G23970 2.0kb downstream 2.0kb downstream 2000   false scaffold_3: 4961065-4963064 Arabidopsis lyrata
AL3G23970 5.0kb upstream 5.0kb upstream 6781   true scaffold_3: 4954284-4961064 Arabidopsis lyrata
AL3G23970 5.0kb upstream 5.0kb upstream 5000   false scaffold_3: 4954284-4959283 Arabidopsis lyrata
AL3G23970 5.0kb downstream 5.0kb downstream 6781   true scaffold_3: 4959284-4966064 Arabidopsis lyrata
AL3G23970 5.0kb downstream 5.0kb downstream 5000   false scaffold_3: 4961065-4966064 Arabidopsis lyrata
AL3G23970 10.0kb upstream 10.0kb upstream 11781   true scaffold_3: 4949284-4961064 Arabidopsis lyrata
AL3G23970 10.0kb upstream 10.0kb upstream 10000   false scaffold_3: 4949284-4959283 Arabidopsis lyrata
AL3G23970 10.0kb downstream 10.0kb downstream 11781   true scaffold_3: 4959284-4971064 Arabidopsis lyrata
AL3G23970 10.0kb downstream 10.0kb downstream 10000   false scaffold_3: 4961065-4971064 Arabidopsis lyrata

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122367859 5261 Brassicaceae View MSA
123840813 5264 Brassicales-Malvales View MSA
124322787 5266 SBM View MSA
124248764 5268 Malvidae View MSA
124070153 5270 Rosid View MSA
123737898 5271 Pentapetalae View MSA
122796234 5272 Eudicot View MSA
122050625 5273 Angiosperm View MSA
121312034 5274 Embryophyte View MSA
123349247 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain