Gene : AL3G23920 A. lyrata v2.1

Defline:  (1 of 1) K03950 - NADH dehydrogenase (ubiquinone) 1 alpha subcomplex subunit 6 (NDUFA6) Genomic Order:  1320
Name:  ? AL3G23920 Secondary Identifier:  ? PAC:35940178

Sequence Feature Displayer

Ontology Annotation Displayer

3 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Alyrata PWY-3781 Arabidopsis lyrata pathologic  
Alyrata PWY-4302 Arabidopsis lyrata pathologic  
Alyrata PWY-5083 Arabidopsis lyrata pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AL3G23920 0.5kb upstream 0.5kb upstream 2031   true scaffold_3: 4944509-4946539 Arabidopsis lyrata
AL3G23920 0.5kb upstream 0.5kb upstream 500   false scaffold_3: 4946040-4946539 Arabidopsis lyrata
AL3G23920 0.5kb downstream 0.5kb downstream 2031   true scaffold_3: 4944009-4946039 Arabidopsis lyrata
AL3G23920 0.5kb downstream 0.5kb downstream 500   false scaffold_3: 4944009-4944508 Arabidopsis lyrata
AL3G23920 1.0kb upstream 1.0kb upstream 2531   true scaffold_3: 4944509-4947039 Arabidopsis lyrata
AL3G23920 1.0kb upstream 1.0kb upstream 1000   false scaffold_3: 4946040-4947039 Arabidopsis lyrata
AL3G23920 1.0kb downstream 1.0kb downstream 2531   true scaffold_3: 4943509-4946039 Arabidopsis lyrata
AL3G23920 1.0kb downstream 1.0kb downstream 1000   false scaffold_3: 4943509-4944508 Arabidopsis lyrata
AL3G23920 2.0kb upstream 2.0kb upstream 3531   true scaffold_3: 4944509-4948039 Arabidopsis lyrata
AL3G23920 2.0kb upstream 2.0kb upstream 2000   false scaffold_3: 4946040-4948039 Arabidopsis lyrata
AL3G23920 2.0kb downstream 2.0kb downstream 3531   true scaffold_3: 4942509-4946039 Arabidopsis lyrata
AL3G23920 2.0kb downstream 2.0kb downstream 2000   false scaffold_3: 4942509-4944508 Arabidopsis lyrata
AL3G23920 5.0kb upstream 5.0kb upstream 6531   true scaffold_3: 4944509-4951039 Arabidopsis lyrata
AL3G23920 5.0kb upstream 5.0kb upstream 5000   false scaffold_3: 4946040-4951039 Arabidopsis lyrata
AL3G23920 5.0kb downstream 5.0kb downstream 6531   true scaffold_3: 4939509-4946039 Arabidopsis lyrata
AL3G23920 5.0kb downstream 5.0kb downstream 5000   false scaffold_3: 4939509-4944508 Arabidopsis lyrata
AL3G23920 10.0kb upstream 10.0kb upstream 11531   true scaffold_3: 4944509-4956039 Arabidopsis lyrata
AL3G23920 10.0kb upstream 10.0kb upstream 10000   false scaffold_3: 4946040-4956039 Arabidopsis lyrata
AL3G23920 10.0kb downstream 10.0kb downstream 11531   true scaffold_3: 4934509-4946039 Arabidopsis lyrata
AL3G23920 10.0kb downstream 10.0kb downstream 10000   false scaffold_3: 4934509-4944508 Arabidopsis lyrata

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122041345 5273 Angiosperm View MSA
122376963 5261 Brassicaceae View MSA
123831504 5264 Brassicales-Malvales View MSA
124343187 5266 SBM View MSA
124239570 5268 Malvidae View MSA
124060660 5270 Rosid View MSA
123740725 5271 Pentapetalae View MSA
122787479 5272 Eudicot View MSA
121345950 5274 Embryophyte View MSA
123424820 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain