Gene : AL3G24450 A. lyrata v2.1
Defline:  (1 of 8) PF01535//PF13041//PF13812//PF14432 - PPR repeat (PPR) // PPR repeat family (PPR_2) // Pentatricopeptide repeat domain (PPR_3) // DYW family of nucleic acid deaminases (DYW_deaminase) Genomic Order:  1370
Name:  ? AL3G24450 Secondary Identifier:  ? PAC:35943925
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3 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AL3G24450 0.5kb upstream 0.5kb upstream 2765   true scaffold_3: 5107279-5110043 Arabidopsis lyrata
AL3G24450 0.5kb upstream 0.5kb upstream 500   false scaffold_3: 5109544-5110043 Arabidopsis lyrata
AL3G24450 0.5kb downstream 0.5kb downstream 2765   true scaffold_3: 5106779-5109543 Arabidopsis lyrata
AL3G24450 0.5kb downstream 0.5kb downstream 500   false scaffold_3: 5106779-5107278 Arabidopsis lyrata
AL3G24450 1.0kb upstream 1.0kb upstream 3265   true scaffold_3: 5107279-5110543 Arabidopsis lyrata
AL3G24450 1.0kb upstream 1.0kb upstream 1000   false scaffold_3: 5109544-5110543 Arabidopsis lyrata
AL3G24450 1.0kb downstream 1.0kb downstream 3265   true scaffold_3: 5106279-5109543 Arabidopsis lyrata
AL3G24450 1.0kb downstream 1.0kb downstream 1000   false scaffold_3: 5106279-5107278 Arabidopsis lyrata
AL3G24450 2.0kb upstream 2.0kb upstream 4265   true scaffold_3: 5107279-5111543 Arabidopsis lyrata
AL3G24450 2.0kb upstream 2.0kb upstream 2000   false scaffold_3: 5109544-5111543 Arabidopsis lyrata
AL3G24450 2.0kb downstream 2.0kb downstream 4265   true scaffold_3: 5105279-5109543 Arabidopsis lyrata
AL3G24450 2.0kb downstream 2.0kb downstream 2000   false scaffold_3: 5105279-5107278 Arabidopsis lyrata
AL3G24450 5.0kb upstream 5.0kb upstream 7265   true scaffold_3: 5107279-5114543 Arabidopsis lyrata
AL3G24450 5.0kb upstream 5.0kb upstream 5000   false scaffold_3: 5109544-5114543 Arabidopsis lyrata
AL3G24450 5.0kb downstream 5.0kb downstream 7265   true scaffold_3: 5102279-5109543 Arabidopsis lyrata
AL3G24450 5.0kb downstream 5.0kb downstream 5000   false scaffold_3: 5102279-5107278 Arabidopsis lyrata
AL3G24450 10.0kb upstream 10.0kb upstream 12265   true scaffold_3: 5107279-5119543 Arabidopsis lyrata
AL3G24450 10.0kb upstream 10.0kb upstream 10000   false scaffold_3: 5109544-5119543 Arabidopsis lyrata
AL3G24450 10.0kb downstream 10.0kb downstream 12265   true scaffold_3: 5097279-5109543 Arabidopsis lyrata
AL3G24450 10.0kb downstream 10.0kb downstream 10000   false scaffold_3: 5097279-5107278 Arabidopsis lyrata

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122369566 5261 Brassicaceae View MSA
123831781 5264 Brassicales-Malvales View MSA
124321746 5266 SBM View MSA
124238283 5268 Malvidae View MSA
124063549 5270 Rosid View MSA
123753779 5271 Pentapetalae View MSA
122797667 5272 Eudicot View MSA
122051669 5273 Angiosperm View MSA
123429046 5275 Viridiplantae View MSA
121351733 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain