Gene : AL3G22980 A. lyrata v2.1

Defline:  (1 of 1) PTHR10641:SF540 - MYB TRANSCRIPTION FACTOR Genomic Order:  1231
Name:  ? AL3G22980 Secondary Identifier:  ? PAC:35942103

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AL3G22980 0.5kb upstream 0.5kb upstream 3464   true scaffold_3: 4589216-4592679 Arabidopsis lyrata
AL3G22980 0.5kb upstream 0.5kb upstream 500   false scaffold_3: 4589216-4589715 Arabidopsis lyrata
AL3G22980 0.5kb downstream 0.5kb downstream 3464   true scaffold_3: 4589716-4593179 Arabidopsis lyrata
AL3G22980 0.5kb downstream 0.5kb downstream 500   false scaffold_3: 4592680-4593179 Arabidopsis lyrata
AL3G22980 1.0kb upstream 1.0kb upstream 3964   true scaffold_3: 4588716-4592679 Arabidopsis lyrata
AL3G22980 1.0kb upstream 1.0kb upstream 1000   false scaffold_3: 4588716-4589715 Arabidopsis lyrata
AL3G22980 1.0kb downstream 1.0kb downstream 3964   true scaffold_3: 4589716-4593679 Arabidopsis lyrata
AL3G22980 1.0kb downstream 1.0kb downstream 1000   false scaffold_3: 4592680-4593679 Arabidopsis lyrata
AL3G22980 2.0kb upstream 2.0kb upstream 4964   true scaffold_3: 4587716-4592679 Arabidopsis lyrata
AL3G22980 2.0kb upstream 2.0kb upstream 2000   false scaffold_3: 4587716-4589715 Arabidopsis lyrata
AL3G22980 2.0kb downstream 2.0kb downstream 4964   true scaffold_3: 4589716-4594679 Arabidopsis lyrata
AL3G22980 2.0kb downstream 2.0kb downstream 2000   false scaffold_3: 4592680-4594679 Arabidopsis lyrata
AL3G22980 5.0kb upstream 5.0kb upstream 7964   true scaffold_3: 4584716-4592679 Arabidopsis lyrata
AL3G22980 5.0kb upstream 5.0kb upstream 5000   false scaffold_3: 4584716-4589715 Arabidopsis lyrata
AL3G22980 5.0kb downstream 5.0kb downstream 7964   true scaffold_3: 4589716-4597679 Arabidopsis lyrata
AL3G22980 5.0kb downstream 5.0kb downstream 5000   false scaffold_3: 4592680-4597679 Arabidopsis lyrata
AL3G22980 10.0kb upstream 10.0kb upstream 12964   true scaffold_3: 4579716-4592679 Arabidopsis lyrata
AL3G22980 10.0kb upstream 10.0kb upstream 10000   false scaffold_3: 4579716-4589715 Arabidopsis lyrata
AL3G22980 10.0kb downstream 10.0kb downstream 12964   true scaffold_3: 4589716-4602679 Arabidopsis lyrata
AL3G22980 10.0kb downstream 10.0kb downstream 10000   false scaffold_3: 4592680-4602679 Arabidopsis lyrata

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122372732 5261 Brassicaceae View MSA
123836271 5264 Brassicales-Malvales View MSA
124342756 5266 SBM View MSA
124244444 5268 Malvidae View MSA
124068155 5270 Rosid View MSA
123747278 5271 Pentapetalae View MSA
122786891 5272 Eudicot View MSA
122046839 5273 Angiosperm View MSA
123429079 5275 Viridiplantae View MSA
121350966 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain