Gene : AL3G22770 A. lyrata v2.1

Defline:  (1 of 3) K02941 - large subunit ribosomal protein LP0 (RP-LP0, RPLP0) Genomic Order:  1213
Name:  ? AL3G22770 Secondary Identifier:  ? PAC:35941052

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AL3G22770 0.5kb upstream 0.5kb upstream 2077   true scaffold_3: 4506682-4508758 Arabidopsis lyrata
AL3G22770 0.5kb upstream 0.5kb upstream 500   false scaffold_3: 4506682-4507181 Arabidopsis lyrata
AL3G22770 0.5kb downstream 0.5kb downstream 2077   true scaffold_3: 4507182-4509258 Arabidopsis lyrata
AL3G22770 0.5kb downstream 0.5kb downstream 500   false scaffold_3: 4508759-4509258 Arabidopsis lyrata
AL3G22770 1.0kb upstream 1.0kb upstream 2577   true scaffold_3: 4506182-4508758 Arabidopsis lyrata
AL3G22770 1.0kb upstream 1.0kb upstream 1000   false scaffold_3: 4506182-4507181 Arabidopsis lyrata
AL3G22770 1.0kb downstream 1.0kb downstream 2577   true scaffold_3: 4507182-4509758 Arabidopsis lyrata
AL3G22770 1.0kb downstream 1.0kb downstream 1000   false scaffold_3: 4508759-4509758 Arabidopsis lyrata
AL3G22770 2.0kb upstream 2.0kb upstream 3577   true scaffold_3: 4505182-4508758 Arabidopsis lyrata
AL3G22770 2.0kb upstream 2.0kb upstream 2000   false scaffold_3: 4505182-4507181 Arabidopsis lyrata
AL3G22770 2.0kb downstream 2.0kb downstream 3577   true scaffold_3: 4507182-4510758 Arabidopsis lyrata
AL3G22770 2.0kb downstream 2.0kb downstream 2000   false scaffold_3: 4508759-4510758 Arabidopsis lyrata
AL3G22770 5.0kb upstream 5.0kb upstream 6577   true scaffold_3: 4502182-4508758 Arabidopsis lyrata
AL3G22770 5.0kb upstream 5.0kb upstream 5000   false scaffold_3: 4502182-4507181 Arabidopsis lyrata
AL3G22770 5.0kb downstream 5.0kb downstream 6577   true scaffold_3: 4507182-4513758 Arabidopsis lyrata
AL3G22770 5.0kb downstream 5.0kb downstream 5000   false scaffold_3: 4508759-4513758 Arabidopsis lyrata
AL3G22770 10.0kb upstream 10.0kb upstream 11577   true scaffold_3: 4497182-4508758 Arabidopsis lyrata
AL3G22770 10.0kb upstream 10.0kb upstream 10000   false scaffold_3: 4497182-4507181 Arabidopsis lyrata
AL3G22770 10.0kb downstream 10.0kb downstream 11577   true scaffold_3: 4507182-4518758 Arabidopsis lyrata
AL3G22770 10.0kb downstream 10.0kb downstream 10000   false scaffold_3: 4508759-4518758 Arabidopsis lyrata

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122378301 5261 Brassicaceae View MSA
123836746 5264 Brassicales-Malvales View MSA
124342925 5266 SBM View MSA
124243369 5268 Malvidae View MSA
124061567 5270 Rosid View MSA
123747108 5271 Pentapetalae View MSA
122786385 5272 Eudicot View MSA
122042027 5273 Angiosperm View MSA
121345246 5274 Embryophyte View MSA
123428323 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain