Gene : AL3G22170 A. lyrata v2.1

Defline:  (1 of 1) K18677 - galacturonokinase (GALAK) Genomic Order:  1156
Name:  ? AL3G22170 Secondary Identifier:  ? PAC:35941283

Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Alyrata PWY-4 Arabidopsis lyrata pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AL3G22170 0.5kb upstream 0.5kb upstream 4823   true scaffold_3: 4290147-4294969 Arabidopsis lyrata
AL3G22170 0.5kb upstream 0.5kb upstream 500   false scaffold_3: 4294470-4294969 Arabidopsis lyrata
AL3G22170 0.5kb downstream 0.5kb downstream 4823   true scaffold_3: 4289647-4294469 Arabidopsis lyrata
AL3G22170 0.5kb downstream 0.5kb downstream 500   false scaffold_3: 4289647-4290146 Arabidopsis lyrata
AL3G22170 1.0kb upstream 1.0kb upstream 5323   true scaffold_3: 4290147-4295469 Arabidopsis lyrata
AL3G22170 1.0kb upstream 1.0kb upstream 1000   false scaffold_3: 4294470-4295469 Arabidopsis lyrata
AL3G22170 1.0kb downstream 1.0kb downstream 5323   true scaffold_3: 4289147-4294469 Arabidopsis lyrata
AL3G22170 1.0kb downstream 1.0kb downstream 1000   false scaffold_3: 4289147-4290146 Arabidopsis lyrata
AL3G22170 2.0kb upstream 2.0kb upstream 6323   true scaffold_3: 4290147-4296469 Arabidopsis lyrata
AL3G22170 2.0kb upstream 2.0kb upstream 2000   false scaffold_3: 4294470-4296469 Arabidopsis lyrata
AL3G22170 2.0kb downstream 2.0kb downstream 6323   true scaffold_3: 4288147-4294469 Arabidopsis lyrata
AL3G22170 2.0kb downstream 2.0kb downstream 2000   false scaffold_3: 4288147-4290146 Arabidopsis lyrata
AL3G22170 5.0kb upstream 5.0kb upstream 9323   true scaffold_3: 4290147-4299469 Arabidopsis lyrata
AL3G22170 5.0kb upstream 5.0kb upstream 5000   false scaffold_3: 4294470-4299469 Arabidopsis lyrata
AL3G22170 5.0kb downstream 5.0kb downstream 9323   true scaffold_3: 4285147-4294469 Arabidopsis lyrata
AL3G22170 5.0kb downstream 5.0kb downstream 5000   false scaffold_3: 4285147-4290146 Arabidopsis lyrata
AL3G22170 10.0kb upstream 10.0kb upstream 14323   true scaffold_3: 4290147-4304469 Arabidopsis lyrata
AL3G22170 10.0kb upstream 10.0kb upstream 10000   false scaffold_3: 4294470-4304469 Arabidopsis lyrata
AL3G22170 10.0kb downstream 10.0kb downstream 14323   true scaffold_3: 4280147-4294469 Arabidopsis lyrata
AL3G22170 10.0kb downstream 10.0kb downstream 10000   false scaffold_3: 4280147-4290146 Arabidopsis lyrata

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122363722 5261 Brassicaceae View MSA
123828749 5264 Brassicales-Malvales View MSA
124339525 5266 SBM View MSA
124242560 5268 Malvidae View MSA
124050204 5270 Rosid View MSA
123740556 5271 Pentapetalae View MSA
122789142 5272 Eudicot View MSA
122041803 5273 Angiosperm View MSA
121344936 5274 Embryophyte View MSA
123425309 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain