Gene : AL3G26630 A. lyrata v2.1

Defline:  (1 of 2) PTHR31707:SF55 - PECTINESTERASE 2-RELATED Genomic Order:  1581
Name:  ? AL3G26630 Secondary Identifier:  ? PAC:35943615

Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Alyrata PWY-1081 Arabidopsis lyrata pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AL3G26630 0.5kb upstream 0.5kb upstream 3714   true scaffold_3: 5973184-5976897 Arabidopsis lyrata
AL3G26630 0.5kb upstream 0.5kb upstream 500   false scaffold_3: 5976398-5976897 Arabidopsis lyrata
AL3G26630 0.5kb downstream 0.5kb downstream 3714   true scaffold_3: 5972684-5976397 Arabidopsis lyrata
AL3G26630 0.5kb downstream 0.5kb downstream 500   false scaffold_3: 5972684-5973183 Arabidopsis lyrata
AL3G26630 1.0kb upstream 1.0kb upstream 4214   true scaffold_3: 5973184-5977397 Arabidopsis lyrata
AL3G26630 1.0kb upstream 1.0kb upstream 1000   false scaffold_3: 5976398-5977397 Arabidopsis lyrata
AL3G26630 1.0kb downstream 1.0kb downstream 4214   true scaffold_3: 5972184-5976397 Arabidopsis lyrata
AL3G26630 1.0kb downstream 1.0kb downstream 1000   false scaffold_3: 5972184-5973183 Arabidopsis lyrata
AL3G26630 2.0kb upstream 2.0kb upstream 5214   true scaffold_3: 5973184-5978397 Arabidopsis lyrata
AL3G26630 2.0kb upstream 2.0kb upstream 2000   false scaffold_3: 5976398-5978397 Arabidopsis lyrata
AL3G26630 2.0kb downstream 2.0kb downstream 5214   true scaffold_3: 5971184-5976397 Arabidopsis lyrata
AL3G26630 2.0kb downstream 2.0kb downstream 2000   false scaffold_3: 5971184-5973183 Arabidopsis lyrata
AL3G26630 5.0kb upstream 5.0kb upstream 8214   true scaffold_3: 5973184-5981397 Arabidopsis lyrata
AL3G26630 5.0kb upstream 5.0kb upstream 5000   false scaffold_3: 5976398-5981397 Arabidopsis lyrata
AL3G26630 5.0kb downstream 5.0kb downstream 8214   true scaffold_3: 5968184-5976397 Arabidopsis lyrata
AL3G26630 5.0kb downstream 5.0kb downstream 5000   false scaffold_3: 5968184-5973183 Arabidopsis lyrata
AL3G26630 10.0kb upstream 10.0kb upstream 13214   true scaffold_3: 5973184-5986397 Arabidopsis lyrata
AL3G26630 10.0kb upstream 10.0kb upstream 10000   false scaffold_3: 5976398-5986397 Arabidopsis lyrata
AL3G26630 10.0kb downstream 10.0kb downstream 13214   true scaffold_3: 5963184-5976397 Arabidopsis lyrata
AL3G26630 10.0kb downstream 10.0kb downstream 10000   false scaffold_3: 5963184-5973183 Arabidopsis lyrata

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122367775 5261 Brassicaceae View MSA
123841223 5264 Brassicales-Malvales View MSA
124350468 5266 SBM View MSA
124246887 5268 Malvidae View MSA
124060766 5270 Rosid View MSA
123741705 5271 Pentapetalae View MSA
122792272 5272 Eudicot View MSA
122051530 5273 Angiosperm View MSA
121350573 5274 Embryophyte View MSA
123381802 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain