Gene : AL3G24990 A. lyrata v2.1

Defline:  (1 of 3) PTHR12758:SF13 - GBF-INTERACTING PROTEIN 1 Genomic Order:  1424
Name:  ? AL3G24990 Secondary Identifier:  ? PAC:35941043

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

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20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AL3G24990 0.5kb upstream 0.5kb upstream 3855   true scaffold_3: 5321747-5325601 Arabidopsis lyrata
AL3G24990 0.5kb upstream 0.5kb upstream 500   false scaffold_3: 5325102-5325601 Arabidopsis lyrata
AL3G24990 0.5kb downstream 0.5kb downstream 3855   true scaffold_3: 5321247-5325101 Arabidopsis lyrata
AL3G24990 0.5kb downstream 0.5kb downstream 500   false scaffold_3: 5321247-5321746 Arabidopsis lyrata
AL3G24990 1.0kb upstream 1.0kb upstream 4355   true scaffold_3: 5321747-5326101 Arabidopsis lyrata
AL3G24990 1.0kb upstream 1.0kb upstream 1000   false scaffold_3: 5325102-5326101 Arabidopsis lyrata
AL3G24990 1.0kb downstream 1.0kb downstream 4355   true scaffold_3: 5320747-5325101 Arabidopsis lyrata
AL3G24990 1.0kb downstream 1.0kb downstream 1000   false scaffold_3: 5320747-5321746 Arabidopsis lyrata
AL3G24990 2.0kb upstream 2.0kb upstream 5355   true scaffold_3: 5321747-5327101 Arabidopsis lyrata
AL3G24990 2.0kb upstream 2.0kb upstream 2000   false scaffold_3: 5325102-5327101 Arabidopsis lyrata
AL3G24990 2.0kb downstream 2.0kb downstream 5355   true scaffold_3: 5319747-5325101 Arabidopsis lyrata
AL3G24990 2.0kb downstream 2.0kb downstream 2000   false scaffold_3: 5319747-5321746 Arabidopsis lyrata
AL3G24990 5.0kb upstream 5.0kb upstream 8355   true scaffold_3: 5321747-5330101 Arabidopsis lyrata
AL3G24990 5.0kb upstream 5.0kb upstream 5000   false scaffold_3: 5325102-5330101 Arabidopsis lyrata
AL3G24990 5.0kb downstream 5.0kb downstream 8355   true scaffold_3: 5316747-5325101 Arabidopsis lyrata
AL3G24990 5.0kb downstream 5.0kb downstream 5000   false scaffold_3: 5316747-5321746 Arabidopsis lyrata
AL3G24990 10.0kb upstream 10.0kb upstream 13355   true scaffold_3: 5321747-5335101 Arabidopsis lyrata
AL3G24990 10.0kb upstream 10.0kb upstream 10000   false scaffold_3: 5325102-5335101 Arabidopsis lyrata
AL3G24990 10.0kb downstream 10.0kb downstream 13355   true scaffold_3: 5311747-5325101 Arabidopsis lyrata
AL3G24990 10.0kb downstream 10.0kb downstream 10000   false scaffold_3: 5311747-5321746 Arabidopsis lyrata

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121779855 5273 Angiosperm View MSA
122373415 5261 Brassicaceae View MSA
123841038 5264 Brassicales-Malvales View MSA
124350634 5266 SBM View MSA
124253797 5268 Malvidae View MSA
124069952 5270 Rosid View MSA
123744353 5271 Pentapetalae View MSA
122771039 5272 Eudicot View MSA
121051492 5274 Embryophyte View MSA
123091579 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain