Gene : AL3G25450 A. lyrata v2.1

Defline:  (1 of 1) PTHR10641:SF547 - TRANSCRIPTION REPRESSOR MYB5 Genomic Order:  1466
Name:  ? AL3G25450 Secondary Identifier:  ? PAC:35943911

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Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

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20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AL3G25450 0.5kb upstream 0.5kb upstream 1999   true scaffold_3: 5503849-5505847 Arabidopsis lyrata
AL3G25450 0.5kb upstream 0.5kb upstream 500   false scaffold_3: 5503849-5504348 Arabidopsis lyrata
AL3G25450 0.5kb downstream 0.5kb downstream 1999   true scaffold_3: 5504349-5506347 Arabidopsis lyrata
AL3G25450 0.5kb downstream 0.5kb downstream 500   false scaffold_3: 5505848-5506347 Arabidopsis lyrata
AL3G25450 1.0kb upstream 1.0kb upstream 2499   true scaffold_3: 5503349-5505847 Arabidopsis lyrata
AL3G25450 1.0kb upstream 1.0kb upstream 1000   false scaffold_3: 5503349-5504348 Arabidopsis lyrata
AL3G25450 1.0kb downstream 1.0kb downstream 2499   true scaffold_3: 5504349-5506847 Arabidopsis lyrata
AL3G25450 1.0kb downstream 1.0kb downstream 1000   false scaffold_3: 5505848-5506847 Arabidopsis lyrata
AL3G25450 2.0kb upstream 2.0kb upstream 3499   true scaffold_3: 5502349-5505847 Arabidopsis lyrata
AL3G25450 2.0kb upstream 2.0kb upstream 2000   false scaffold_3: 5502349-5504348 Arabidopsis lyrata
AL3G25450 2.0kb downstream 2.0kb downstream 3499   true scaffold_3: 5504349-5507847 Arabidopsis lyrata
AL3G25450 2.0kb downstream 2.0kb downstream 2000   false scaffold_3: 5505848-5507847 Arabidopsis lyrata
AL3G25450 5.0kb upstream 5.0kb upstream 6499   true scaffold_3: 5499349-5505847 Arabidopsis lyrata
AL3G25450 5.0kb upstream 5.0kb upstream 5000   false scaffold_3: 5499349-5504348 Arabidopsis lyrata
AL3G25450 5.0kb downstream 5.0kb downstream 6499   true scaffold_3: 5504349-5510847 Arabidopsis lyrata
AL3G25450 5.0kb downstream 5.0kb downstream 5000   false scaffold_3: 5505848-5510847 Arabidopsis lyrata
AL3G25450 10.0kb upstream 10.0kb upstream 11499   true scaffold_3: 5494349-5505847 Arabidopsis lyrata
AL3G25450 10.0kb upstream 10.0kb upstream 10000   false scaffold_3: 5494349-5504348 Arabidopsis lyrata
AL3G25450 10.0kb downstream 10.0kb downstream 11499   true scaffold_3: 5504349-5515847 Arabidopsis lyrata
AL3G25450 10.0kb downstream 10.0kb downstream 10000   false scaffold_3: 5505848-5515847 Arabidopsis lyrata

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122378625 5261 Brassicaceae View MSA
123835031 5264 Brassicales-Malvales View MSA
124351070 5266 SBM View MSA
124243976 5268 Malvidae View MSA
124071860 5270 Rosid View MSA
123753736 5271 Pentapetalae View MSA
122796974 5272 Eudicot View MSA
122049924 5273 Angiosperm View MSA
123429079 5275 Viridiplantae View MSA
121351179 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain