Gene : AL3G24610 A. lyrata v2.1

Defline:  (1 of 1) PTHR21043:SF1 - PROTEIN IOJAP, CHLOROPLASTIC Genomic Order:  1386
Name:  ? AL3G24610 Secondary Identifier:  ? PAC:35943731

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AL3G24610 0.5kb upstream 0.5kb upstream 2204   true scaffold_3: 5185748-5187951 Arabidopsis lyrata
AL3G24610 0.5kb upstream 0.5kb upstream 500   false scaffold_3: 5185748-5186247 Arabidopsis lyrata
AL3G24610 0.5kb downstream 0.5kb downstream 2204   true scaffold_3: 5186248-5188451 Arabidopsis lyrata
AL3G24610 0.5kb downstream 0.5kb downstream 500   false scaffold_3: 5187952-5188451 Arabidopsis lyrata
AL3G24610 1.0kb upstream 1.0kb upstream 2704   true scaffold_3: 5185248-5187951 Arabidopsis lyrata
AL3G24610 1.0kb upstream 1.0kb upstream 1000   false scaffold_3: 5185248-5186247 Arabidopsis lyrata
AL3G24610 1.0kb downstream 1.0kb downstream 2704   true scaffold_3: 5186248-5188951 Arabidopsis lyrata
AL3G24610 1.0kb downstream 1.0kb downstream 1000   false scaffold_3: 5187952-5188951 Arabidopsis lyrata
AL3G24610 2.0kb upstream 2.0kb upstream 3704   true scaffold_3: 5184248-5187951 Arabidopsis lyrata
AL3G24610 2.0kb upstream 2.0kb upstream 2000   false scaffold_3: 5184248-5186247 Arabidopsis lyrata
AL3G24610 2.0kb downstream 2.0kb downstream 3704   true scaffold_3: 5186248-5189951 Arabidopsis lyrata
AL3G24610 2.0kb downstream 2.0kb downstream 2000   false scaffold_3: 5187952-5189951 Arabidopsis lyrata
AL3G24610 5.0kb upstream 5.0kb upstream 6704   true scaffold_3: 5181248-5187951 Arabidopsis lyrata
AL3G24610 5.0kb upstream 5.0kb upstream 5000   false scaffold_3: 5181248-5186247 Arabidopsis lyrata
AL3G24610 5.0kb downstream 5.0kb downstream 6704   true scaffold_3: 5186248-5192951 Arabidopsis lyrata
AL3G24610 5.0kb downstream 5.0kb downstream 5000   false scaffold_3: 5187952-5192951 Arabidopsis lyrata
AL3G24610 10.0kb upstream 10.0kb upstream 11704   true scaffold_3: 5176248-5187951 Arabidopsis lyrata
AL3G24610 10.0kb upstream 10.0kb upstream 10000   false scaffold_3: 5176248-5186247 Arabidopsis lyrata
AL3G24610 10.0kb downstream 10.0kb downstream 11704   true scaffold_3: 5186248-5197951 Arabidopsis lyrata
AL3G24610 10.0kb downstream 10.0kb downstream 10000   false scaffold_3: 5187952-5197951 Arabidopsis lyrata

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122363842 5261 Brassicaceae View MSA
123840233 5264 Brassicales-Malvales View MSA
124344266 5266 SBM View MSA
124238972 5268 Malvidae View MSA
124067704 5270 Rosid View MSA
123743843 5271 Pentapetalae View MSA
122785584 5272 Eudicot View MSA
122043136 5273 Angiosperm View MSA
121343948 5274 Embryophyte View MSA
123426763 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain