Gene : AL3G28860 A. lyrata v2.1

Defline:  (1 of 3) K17362 - acyl-coenzyme A thioesterase 13 [EC:3.1.2.-] (ACOT13) Genomic Order:  1794
Name:  ? AL3G28860 Secondary Identifier:  ? PAC:35942708

Sequence Feature Displayer

Ontology Annotation Displayer

5 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Alyrata PWY-1121 Arabidopsis lyrata pathologic  
Alyrata PWY-321 Arabidopsis lyrata pathologic  
Alyrata PWY-5148 Arabidopsis lyrata pathologic  
Alyrata PWY-6733 Arabidopsis lyrata pathologic  
Alyrata PWY-735 Arabidopsis lyrata pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AL3G28860 0.5kb upstream 0.5kb upstream 1263   true scaffold_3: 6782013-6783275 Arabidopsis lyrata
AL3G28860 0.5kb upstream 0.5kb upstream 500   false scaffold_3: 6782013-6782512 Arabidopsis lyrata
AL3G28860 0.5kb downstream 0.5kb downstream 1263   true scaffold_3: 6782513-6783775 Arabidopsis lyrata
AL3G28860 0.5kb downstream 0.5kb downstream 500   false scaffold_3: 6783276-6783775 Arabidopsis lyrata
AL3G28860 1.0kb upstream 1.0kb upstream 1763   true scaffold_3: 6781513-6783275 Arabidopsis lyrata
AL3G28860 1.0kb upstream 1.0kb upstream 1000   false scaffold_3: 6781513-6782512 Arabidopsis lyrata
AL3G28860 1.0kb downstream 1.0kb downstream 1763   true scaffold_3: 6782513-6784275 Arabidopsis lyrata
AL3G28860 1.0kb downstream 1.0kb downstream 1000   false scaffold_3: 6783276-6784275 Arabidopsis lyrata
AL3G28860 2.0kb upstream 2.0kb upstream 2763   true scaffold_3: 6780513-6783275 Arabidopsis lyrata
AL3G28860 2.0kb upstream 2.0kb upstream 2000   false scaffold_3: 6780513-6782512 Arabidopsis lyrata
AL3G28860 2.0kb downstream 2.0kb downstream 2763   true scaffold_3: 6782513-6785275 Arabidopsis lyrata
AL3G28860 2.0kb downstream 2.0kb downstream 2000   false scaffold_3: 6783276-6785275 Arabidopsis lyrata
AL3G28860 5.0kb upstream 5.0kb upstream 5763   true scaffold_3: 6777513-6783275 Arabidopsis lyrata
AL3G28860 5.0kb upstream 5.0kb upstream 5000   false scaffold_3: 6777513-6782512 Arabidopsis lyrata
AL3G28860 5.0kb downstream 5.0kb downstream 5763   true scaffold_3: 6782513-6788275 Arabidopsis lyrata
AL3G28860 5.0kb downstream 5.0kb downstream 5000   false scaffold_3: 6783276-6788275 Arabidopsis lyrata
AL3G28860 10.0kb upstream 10.0kb upstream 10763   true scaffold_3: 6772513-6783275 Arabidopsis lyrata
AL3G28860 10.0kb upstream 10.0kb upstream 10000   false scaffold_3: 6772513-6782512 Arabidopsis lyrata
AL3G28860 10.0kb downstream 10.0kb downstream 10763   true scaffold_3: 6782513-6793275 Arabidopsis lyrata
AL3G28860 10.0kb downstream 10.0kb downstream 10000   false scaffold_3: 6783276-6793275 Arabidopsis lyrata

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122377845 5261 Brassicaceae View MSA
123840254 5264 Brassicales-Malvales View MSA
124336477 5266 SBM View MSA
124252393 5268 Malvidae View MSA
124050291 5270 Rosid View MSA
123743856 5271 Pentapetalae View MSA
122790671 5272 Eudicot View MSA
122049219 5273 Angiosperm View MSA
121311303 5274 Embryophyte View MSA
123428627 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain