Gene : AL3G28310 A. lyrata v2.1

Defline:  (1 of 5) K06130 - lysophospholipase II (LYPLA2) Genomic Order:  1740
Name:  ? AL3G28310 Secondary Identifier:  ? PAC:35942302

Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Alyrata PWY-7409 Arabidopsis lyrata pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AL3G28310 0.5kb upstream 0.5kb upstream 2560   true scaffold_3: 6597271-6599830 Arabidopsis lyrata
AL3G28310 0.5kb upstream 0.5kb upstream 500   false scaffold_3: 6597271-6597770 Arabidopsis lyrata
AL3G28310 0.5kb downstream 0.5kb downstream 2560   true scaffold_3: 6597771-6600330 Arabidopsis lyrata
AL3G28310 0.5kb downstream 0.5kb downstream 500   false scaffold_3: 6599831-6600330 Arabidopsis lyrata
AL3G28310 1.0kb upstream 1.0kb upstream 3060   true scaffold_3: 6596771-6599830 Arabidopsis lyrata
AL3G28310 1.0kb upstream 1.0kb upstream 1000   false scaffold_3: 6596771-6597770 Arabidopsis lyrata
AL3G28310 1.0kb downstream 1.0kb downstream 3060   true scaffold_3: 6597771-6600830 Arabidopsis lyrata
AL3G28310 1.0kb downstream 1.0kb downstream 1000   false scaffold_3: 6599831-6600830 Arabidopsis lyrata
AL3G28310 2.0kb upstream 2.0kb upstream 4060   true scaffold_3: 6595771-6599830 Arabidopsis lyrata
AL3G28310 2.0kb upstream 2.0kb upstream 2000   false scaffold_3: 6595771-6597770 Arabidopsis lyrata
AL3G28310 2.0kb downstream 2.0kb downstream 4060   true scaffold_3: 6597771-6601830 Arabidopsis lyrata
AL3G28310 2.0kb downstream 2.0kb downstream 2000   false scaffold_3: 6599831-6601830 Arabidopsis lyrata
AL3G28310 5.0kb upstream 5.0kb upstream 7060   true scaffold_3: 6592771-6599830 Arabidopsis lyrata
AL3G28310 5.0kb upstream 5.0kb upstream 5000   false scaffold_3: 6592771-6597770 Arabidopsis lyrata
AL3G28310 5.0kb downstream 5.0kb downstream 7060   true scaffold_3: 6597771-6604830 Arabidopsis lyrata
AL3G28310 5.0kb downstream 5.0kb downstream 5000   false scaffold_3: 6599831-6604830 Arabidopsis lyrata
AL3G28310 10.0kb upstream 10.0kb upstream 12060   true scaffold_3: 6587771-6599830 Arabidopsis lyrata
AL3G28310 10.0kb upstream 10.0kb upstream 10000   false scaffold_3: 6587771-6597770 Arabidopsis lyrata
AL3G28310 10.0kb downstream 10.0kb downstream 12060   true scaffold_3: 6597771-6609830 Arabidopsis lyrata
AL3G28310 10.0kb downstream 10.0kb downstream 10000   false scaffold_3: 6599831-6609830 Arabidopsis lyrata

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122361094 5261 Brassicaceae View MSA
123836615 5264 Brassicales-Malvales View MSA
124338971 5266 SBM View MSA
124245146 5268 Malvidae View MSA
124070848 5270 Rosid View MSA
123747021 5271 Pentapetalae View MSA
122795492 5272 Eudicot View MSA
122046747 5273 Angiosperm View MSA
121349351 5274 Embryophyte View MSA
123428773 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain