Gene : AL3G28570 A. lyrata v2.1

Defline:  (1 of 2) PTHR12526//PTHR12526:SF160 - GLYCOSYLTRANSFERASE // SUBFAMILY NOT NAMED Genomic Order:  1766
Name:  ? AL3G28570 Secondary Identifier:  ? PAC:35940910

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AL3G28570 0.5kb upstream 0.5kb upstream 3929   true scaffold_3: 6685228-6689156 Arabidopsis lyrata
AL3G28570 0.5kb upstream 0.5kb upstream 500   false scaffold_3: 6688657-6689156 Arabidopsis lyrata
AL3G28570 0.5kb downstream 0.5kb downstream 3929   true scaffold_3: 6684728-6688656 Arabidopsis lyrata
AL3G28570 0.5kb downstream 0.5kb downstream 500   false scaffold_3: 6684728-6685227 Arabidopsis lyrata
AL3G28570 1.0kb upstream 1.0kb upstream 4429   true scaffold_3: 6685228-6689656 Arabidopsis lyrata
AL3G28570 1.0kb upstream 1.0kb upstream 1000   false scaffold_3: 6688657-6689656 Arabidopsis lyrata
AL3G28570 1.0kb downstream 1.0kb downstream 4429   true scaffold_3: 6684228-6688656 Arabidopsis lyrata
AL3G28570 1.0kb downstream 1.0kb downstream 1000   false scaffold_3: 6684228-6685227 Arabidopsis lyrata
AL3G28570 2.0kb upstream 2.0kb upstream 5429   true scaffold_3: 6685228-6690656 Arabidopsis lyrata
AL3G28570 2.0kb upstream 2.0kb upstream 2000   false scaffold_3: 6688657-6690656 Arabidopsis lyrata
AL3G28570 2.0kb downstream 2.0kb downstream 5429   true scaffold_3: 6683228-6688656 Arabidopsis lyrata
AL3G28570 2.0kb downstream 2.0kb downstream 2000   false scaffold_3: 6683228-6685227 Arabidopsis lyrata
AL3G28570 5.0kb upstream 5.0kb upstream 8429   true scaffold_3: 6685228-6693656 Arabidopsis lyrata
AL3G28570 5.0kb upstream 5.0kb upstream 5000   false scaffold_3: 6688657-6693656 Arabidopsis lyrata
AL3G28570 5.0kb downstream 5.0kb downstream 8429   true scaffold_3: 6680228-6688656 Arabidopsis lyrata
AL3G28570 5.0kb downstream 5.0kb downstream 5000   false scaffold_3: 6680228-6685227 Arabidopsis lyrata
AL3G28570 10.0kb upstream 10.0kb upstream 13429   true scaffold_3: 6685228-6698656 Arabidopsis lyrata
AL3G28570 10.0kb upstream 10.0kb upstream 10000   false scaffold_3: 6688657-6698656 Arabidopsis lyrata
AL3G28570 10.0kb downstream 10.0kb downstream 13429   true scaffold_3: 6675228-6688656 Arabidopsis lyrata
AL3G28570 10.0kb downstream 10.0kb downstream 10000   false scaffold_3: 6675228-6685227 Arabidopsis lyrata

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122368037 5261 Brassicaceae View MSA
123836336 5264 Brassicales-Malvales View MSA
124346758 5266 SBM View MSA
124239792 5268 Malvidae View MSA
124068534 5270 Rosid View MSA
123748931 5271 Pentapetalae View MSA
122790336 5272 Eudicot View MSA
122046924 5273 Angiosperm View MSA
121347329 5274 Embryophyte View MSA
123380528 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain