Gene : AL3G27540 A. lyrata v2.1
Defline:  (1 of 1) PTHR21330:SF2 - E3 SUMO-PROTEIN LIGASE MMS21 Genomic Order:  1669
Name:  ? AL3G27540 Secondary Identifier:  ? PAC:35943816
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

3 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AL3G27540 0.5kb upstream 0.5kb upstream 2722   true scaffold_3: 6331860-6334581 Arabidopsis lyrata
AL3G27540 0.5kb upstream 0.5kb upstream 500   false scaffold_3: 6334082-6334581 Arabidopsis lyrata
AL3G27540 0.5kb downstream 0.5kb downstream 2722   true scaffold_3: 6331360-6334081 Arabidopsis lyrata
AL3G27540 0.5kb downstream 0.5kb downstream 500   false scaffold_3: 6331360-6331859 Arabidopsis lyrata
AL3G27540 1.0kb upstream 1.0kb upstream 3222   true scaffold_3: 6331860-6335081 Arabidopsis lyrata
AL3G27540 1.0kb upstream 1.0kb upstream 1000   false scaffold_3: 6334082-6335081 Arabidopsis lyrata
AL3G27540 1.0kb downstream 1.0kb downstream 3222   true scaffold_3: 6330860-6334081 Arabidopsis lyrata
AL3G27540 1.0kb downstream 1.0kb downstream 1000   false scaffold_3: 6330860-6331859 Arabidopsis lyrata
AL3G27540 2.0kb upstream 2.0kb upstream 4222   true scaffold_3: 6331860-6336081 Arabidopsis lyrata
AL3G27540 2.0kb upstream 2.0kb upstream 2000   false scaffold_3: 6334082-6336081 Arabidopsis lyrata
AL3G27540 2.0kb downstream 2.0kb downstream 4222   true scaffold_3: 6329860-6334081 Arabidopsis lyrata
AL3G27540 2.0kb downstream 2.0kb downstream 2000   false scaffold_3: 6329860-6331859 Arabidopsis lyrata
AL3G27540 5.0kb upstream 5.0kb upstream 7222   true scaffold_3: 6331860-6339081 Arabidopsis lyrata
AL3G27540 5.0kb upstream 5.0kb upstream 5000   false scaffold_3: 6334082-6339081 Arabidopsis lyrata
AL3G27540 5.0kb downstream 5.0kb downstream 7222   true scaffold_3: 6326860-6334081 Arabidopsis lyrata
AL3G27540 5.0kb downstream 5.0kb downstream 5000   false scaffold_3: 6326860-6331859 Arabidopsis lyrata
AL3G27540 10.0kb upstream 10.0kb upstream 12222   true scaffold_3: 6331860-6344081 Arabidopsis lyrata
AL3G27540 10.0kb upstream 10.0kb upstream 10000   false scaffold_3: 6334082-6344081 Arabidopsis lyrata
AL3G27540 10.0kb downstream 10.0kb downstream 12222   true scaffold_3: 6321860-6334081 Arabidopsis lyrata
AL3G27540 10.0kb downstream 10.0kb downstream 10000   false scaffold_3: 6321860-6331859 Arabidopsis lyrata

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122373587 5261 Brassicaceae View MSA
123828349 5264 Brassicales-Malvales View MSA
124340974 5266 SBM View MSA
124238687 5268 Malvidae View MSA
124064105 5270 Rosid View MSA
123740450 5271 Pentapetalae View MSA
122790710 5272 Eudicot View MSA
122044966 5273 Angiosperm View MSA
121344157 5274 Embryophyte View MSA
123424394 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain