Gene : AL3G27260 A. lyrata v2.1

Defline:  (1 of 5) 4.1.1.31 - Phosphoenolpyruvate carboxylase / Phosphoenolpyruvic carboxylase Genomic Order:  1642
Name:  ? AL3G27260 Secondary Identifier:  ? PAC:35944403

Sequence Feature Displayer

Ontology Annotation Displayer

5 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Alyrata PWY-241 Arabidopsis lyrata pathologic  
Alyrata PWY-6549 Arabidopsis lyrata pathologic  
Alyrata PWY-7115 Arabidopsis lyrata pathologic  
Alyrata PWY-7117 Arabidopsis lyrata pathologic  
Alyrata PWYQT-4429 Arabidopsis lyrata pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

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Cufflinks Score Displayer

 

Other

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AL3G27260 0.5kb upstream 0.5kb upstream 5145   true scaffold_3: 6233642-6238786 Arabidopsis lyrata
AL3G27260 0.5kb upstream 0.5kb upstream 500   false scaffold_3: 6233642-6234141 Arabidopsis lyrata
AL3G27260 0.5kb downstream 0.5kb downstream 5145   true scaffold_3: 6234142-6239286 Arabidopsis lyrata
AL3G27260 0.5kb downstream 0.5kb downstream 500   false scaffold_3: 6238787-6239286 Arabidopsis lyrata
AL3G27260 1.0kb upstream 1.0kb upstream 5645   true scaffold_3: 6233142-6238786 Arabidopsis lyrata
AL3G27260 1.0kb upstream 1.0kb upstream 1000   false scaffold_3: 6233142-6234141 Arabidopsis lyrata
AL3G27260 1.0kb downstream 1.0kb downstream 5645   true scaffold_3: 6234142-6239786 Arabidopsis lyrata
AL3G27260 1.0kb downstream 1.0kb downstream 1000   false scaffold_3: 6238787-6239786 Arabidopsis lyrata
AL3G27260 2.0kb upstream 2.0kb upstream 6645   true scaffold_3: 6232142-6238786 Arabidopsis lyrata
AL3G27260 2.0kb upstream 2.0kb upstream 2000   false scaffold_3: 6232142-6234141 Arabidopsis lyrata
AL3G27260 2.0kb downstream 2.0kb downstream 6645   true scaffold_3: 6234142-6240786 Arabidopsis lyrata
AL3G27260 2.0kb downstream 2.0kb downstream 2000   false scaffold_3: 6238787-6240786 Arabidopsis lyrata
AL3G27260 5.0kb upstream 5.0kb upstream 9645   true scaffold_3: 6229142-6238786 Arabidopsis lyrata
AL3G27260 5.0kb upstream 5.0kb upstream 5000   false scaffold_3: 6229142-6234141 Arabidopsis lyrata
AL3G27260 5.0kb downstream 5.0kb downstream 9645   true scaffold_3: 6234142-6243786 Arabidopsis lyrata
AL3G27260 5.0kb downstream 5.0kb downstream 5000   false scaffold_3: 6238787-6243786 Arabidopsis lyrata
AL3G27260 10.0kb upstream 10.0kb upstream 14645   true scaffold_3: 6224142-6238786 Arabidopsis lyrata
AL3G27260 10.0kb upstream 10.0kb upstream 10000   false scaffold_3: 6224142-6234141 Arabidopsis lyrata
AL3G27260 10.0kb downstream 10.0kb downstream 14645   true scaffold_3: 6234142-6248786 Arabidopsis lyrata
AL3G27260 10.0kb downstream 10.0kb downstream 10000   false scaffold_3: 6238787-6248786 Arabidopsis lyrata

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122371065 5261 Brassicaceae View MSA
123833937 5264 Brassicales-Malvales View MSA
124349532 5266 SBM View MSA
124239034 5268 Malvidae View MSA
124070738 5270 Rosid View MSA
123746119 5271 Pentapetalae View MSA
122795161 5272 Eudicot View MSA
122043424 5273 Angiosperm View MSA
123429064 5275 Viridiplantae View MSA
121350778 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain