Gene : AL3G31180 A. lyrata v2.1

Defline:  (1 of 2) 4.1.1.36 - Phosphopantothenoylcysteine decarboxylase / N-((R)-4'-phosphopantothenoyl)-L-cysteine carboxy-lyase Genomic Order:  2020
Name:  ? AL3G31180 Secondary Identifier:  ? PAC:35941464

Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Alyrata COA-PWY Arabidopsis lyrata pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AL3G31180 0.5kb upstream 0.5kb upstream 1665   true scaffold_3: 7694829-7696493 Arabidopsis lyrata
AL3G31180 0.5kb upstream 0.5kb upstream 500   false scaffold_3: 7695994-7696493 Arabidopsis lyrata
AL3G31180 0.5kb downstream 0.5kb downstream 1665   true scaffold_3: 7694329-7695993 Arabidopsis lyrata
AL3G31180 0.5kb downstream 0.5kb downstream 500   false scaffold_3: 7694329-7694828 Arabidopsis lyrata
AL3G31180 1.0kb upstream 1.0kb upstream 2165   true scaffold_3: 7694829-7696993 Arabidopsis lyrata
AL3G31180 1.0kb upstream 1.0kb upstream 1000   false scaffold_3: 7695994-7696993 Arabidopsis lyrata
AL3G31180 1.0kb downstream 1.0kb downstream 2165   true scaffold_3: 7693829-7695993 Arabidopsis lyrata
AL3G31180 1.0kb downstream 1.0kb downstream 1000   false scaffold_3: 7693829-7694828 Arabidopsis lyrata
AL3G31180 2.0kb upstream 2.0kb upstream 3165   true scaffold_3: 7694829-7697993 Arabidopsis lyrata
AL3G31180 2.0kb upstream 2.0kb upstream 2000   false scaffold_3: 7695994-7697993 Arabidopsis lyrata
AL3G31180 2.0kb downstream 2.0kb downstream 3165   true scaffold_3: 7692829-7695993 Arabidopsis lyrata
AL3G31180 2.0kb downstream 2.0kb downstream 2000   false scaffold_3: 7692829-7694828 Arabidopsis lyrata
AL3G31180 5.0kb upstream 5.0kb upstream 6165   true scaffold_3: 7694829-7700993 Arabidopsis lyrata
AL3G31180 5.0kb upstream 5.0kb upstream 5000   false scaffold_3: 7695994-7700993 Arabidopsis lyrata
AL3G31180 5.0kb downstream 5.0kb downstream 6165   true scaffold_3: 7689829-7695993 Arabidopsis lyrata
AL3G31180 5.0kb downstream 5.0kb downstream 5000   false scaffold_3: 7689829-7694828 Arabidopsis lyrata
AL3G31180 10.0kb upstream 10.0kb upstream 11165   true scaffold_3: 7694829-7705993 Arabidopsis lyrata
AL3G31180 10.0kb upstream 10.0kb upstream 10000   false scaffold_3: 7695994-7705993 Arabidopsis lyrata
AL3G31180 10.0kb downstream 10.0kb downstream 11165   true scaffold_3: 7684829-7695993 Arabidopsis lyrata
AL3G31180 10.0kb downstream 10.0kb downstream 10000   false scaffold_3: 7684829-7694828 Arabidopsis lyrata

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122361145 5261 Brassicaceae View MSA
123840077 5264 Brassicales-Malvales View MSA
124350306 5266 SBM View MSA
124242007 5268 Malvidae View MSA
124065086 5270 Rosid View MSA
123739959 5271 Pentapetalae View MSA
122787988 5272 Eudicot View MSA
122043934 5273 Angiosperm View MSA
121347279 5274 Embryophyte View MSA
123427433 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain