Gene : AL3G30460 A. lyrata v2.1

Defline:  (1 of 1) PTHR11964:SF16 - S-ADENOSYLMETHIONINE SYNTHASE 4 Genomic Order:  1948
Name:  ? AL3G30460 Secondary Identifier:  ? PAC:35942016

Sequence Feature Displayer

Ontology Annotation Displayer

5 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Alyrata ETHYL-PWY Arabidopsis lyrata pathologic  
Alyrata PWY-5041 Arabidopsis lyrata pathologic  
Alyrata PWY-7270 Arabidopsis lyrata pathologic  
Alyrata PWY-7528 Arabidopsis lyrata pathologic  
Alyrata SAM-PWY Arabidopsis lyrata pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AL3G30460 0.5kb upstream 0.5kb upstream 2209   true scaffold_3: 7428080-7430288 Arabidopsis lyrata
AL3G30460 0.5kb upstream 0.5kb upstream 500   false scaffold_3: 7429789-7430288 Arabidopsis lyrata
AL3G30460 0.5kb downstream 0.5kb downstream 2209   true scaffold_3: 7427580-7429788 Arabidopsis lyrata
AL3G30460 0.5kb downstream 0.5kb downstream 500   false scaffold_3: 7427580-7428079 Arabidopsis lyrata
AL3G30460 1.0kb upstream 1.0kb upstream 2709   true scaffold_3: 7428080-7430788 Arabidopsis lyrata
AL3G30460 1.0kb upstream 1.0kb upstream 1000   false scaffold_3: 7429789-7430788 Arabidopsis lyrata
AL3G30460 1.0kb downstream 1.0kb downstream 2709   true scaffold_3: 7427080-7429788 Arabidopsis lyrata
AL3G30460 1.0kb downstream 1.0kb downstream 1000   false scaffold_3: 7427080-7428079 Arabidopsis lyrata
AL3G30460 2.0kb upstream 2.0kb upstream 3709   true scaffold_3: 7428080-7431788 Arabidopsis lyrata
AL3G30460 2.0kb upstream 2.0kb upstream 2000   false scaffold_3: 7429789-7431788 Arabidopsis lyrata
AL3G30460 2.0kb downstream 2.0kb downstream 3709   true scaffold_3: 7426080-7429788 Arabidopsis lyrata
AL3G30460 2.0kb downstream 2.0kb downstream 2000   false scaffold_3: 7426080-7428079 Arabidopsis lyrata
AL3G30460 5.0kb upstream 5.0kb upstream 6709   true scaffold_3: 7428080-7434788 Arabidopsis lyrata
AL3G30460 5.0kb upstream 5.0kb upstream 5000   false scaffold_3: 7429789-7434788 Arabidopsis lyrata
AL3G30460 5.0kb downstream 5.0kb downstream 6709   true scaffold_3: 7423080-7429788 Arabidopsis lyrata
AL3G30460 5.0kb downstream 5.0kb downstream 5000   false scaffold_3: 7423080-7428079 Arabidopsis lyrata
AL3G30460 10.0kb upstream 10.0kb upstream 11709   true scaffold_3: 7428080-7439788 Arabidopsis lyrata
AL3G30460 10.0kb upstream 10.0kb upstream 10000   false scaffold_3: 7429789-7439788 Arabidopsis lyrata
AL3G30460 10.0kb downstream 10.0kb downstream 11709   true scaffold_3: 7418080-7429788 Arabidopsis lyrata
AL3G30460 10.0kb downstream 10.0kb downstream 10000   false scaffold_3: 7418080-7428079 Arabidopsis lyrata

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122363526 5261 Brassicaceae View MSA
123839294 5264 Brassicales-Malvales View MSA
124343544 5266 SBM View MSA
124247554 5268 Malvidae View MSA
124071804 5270 Rosid View MSA
123752865 5271 Pentapetalae View MSA
122794208 5272 Eudicot View MSA
122047125 5273 Angiosperm View MSA
121349455 5274 Embryophyte View MSA
123428115 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain