Gene : AL3G30550 A. lyrata v2.1

Defline:  (1 of 2) K02906 - large subunit ribosomal protein L3 (RP-L3, MRPL3, rplC) Genomic Order:  1957
Name:  ? AL3G30550 Secondary Identifier:  ? PAC:35942782

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

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20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AL3G30550 0.5kb upstream 0.5kb upstream 2371   true scaffold_3: 7457928-7460298 Arabidopsis lyrata
AL3G30550 0.5kb upstream 0.5kb upstream 500   false scaffold_3: 7459799-7460298 Arabidopsis lyrata
AL3G30550 0.5kb downstream 0.5kb downstream 2371   true scaffold_3: 7457428-7459798 Arabidopsis lyrata
AL3G30550 0.5kb downstream 0.5kb downstream 500   false scaffold_3: 7457428-7457927 Arabidopsis lyrata
AL3G30550 1.0kb upstream 1.0kb upstream 2871   true scaffold_3: 7457928-7460798 Arabidopsis lyrata
AL3G30550 1.0kb upstream 1.0kb upstream 1000   false scaffold_3: 7459799-7460798 Arabidopsis lyrata
AL3G30550 1.0kb downstream 1.0kb downstream 2871   true scaffold_3: 7456928-7459798 Arabidopsis lyrata
AL3G30550 1.0kb downstream 1.0kb downstream 1000   false scaffold_3: 7456928-7457927 Arabidopsis lyrata
AL3G30550 2.0kb upstream 2.0kb upstream 3871   true scaffold_3: 7457928-7461798 Arabidopsis lyrata
AL3G30550 2.0kb upstream 2.0kb upstream 2000   false scaffold_3: 7459799-7461798 Arabidopsis lyrata
AL3G30550 2.0kb downstream 2.0kb downstream 3871   true scaffold_3: 7455928-7459798 Arabidopsis lyrata
AL3G30550 2.0kb downstream 2.0kb downstream 2000   false scaffold_3: 7455928-7457927 Arabidopsis lyrata
AL3G30550 5.0kb upstream 5.0kb upstream 6871   true scaffold_3: 7457928-7464798 Arabidopsis lyrata
AL3G30550 5.0kb upstream 5.0kb upstream 5000   false scaffold_3: 7459799-7464798 Arabidopsis lyrata
AL3G30550 5.0kb downstream 5.0kb downstream 6871   true scaffold_3: 7452928-7459798 Arabidopsis lyrata
AL3G30550 5.0kb downstream 5.0kb downstream 5000   false scaffold_3: 7452928-7457927 Arabidopsis lyrata
AL3G30550 10.0kb upstream 10.0kb upstream 11871   true scaffold_3: 7457928-7469798 Arabidopsis lyrata
AL3G30550 10.0kb upstream 10.0kb upstream 10000   false scaffold_3: 7459799-7469798 Arabidopsis lyrata
AL3G30550 10.0kb downstream 10.0kb downstream 11871   true scaffold_3: 7447928-7459798 Arabidopsis lyrata
AL3G30550 10.0kb downstream 10.0kb downstream 10000   false scaffold_3: 7447928-7457927 Arabidopsis lyrata

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122041501 5273 Angiosperm View MSA
122366871 5261 Brassicaceae View MSA
123827405 5264 Brassicales-Malvales View MSA
124339990 5266 SBM View MSA
124240515 5268 Malvidae View MSA
124071228 5270 Rosid View MSA
123739154 5271 Pentapetalae View MSA
122789035 5272 Eudicot View MSA
121347550 5274 Embryophyte View MSA
123425117 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain