Gene : AL3G30910 A. lyrata v2.1

Defline:  (1 of 4) K01580 - glutamate decarboxylase (E4.1.1.15, gadB, gadA, GAD) Genomic Order:  1993
Name:  ? AL3G30910 Secondary Identifier:  ? PAC:35940884

Sequence Feature Displayer

Ontology Annotation Displayer

3 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Alyrata GLUDEG-I-PWY Arabidopsis lyrata pathologic  
Alyrata PWY0-1305 Arabidopsis lyrata pathologic  
Alyrata PWY-4321 Arabidopsis lyrata pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AL3G30910 0.5kb upstream 0.5kb upstream 2448   true scaffold_3: 7584221-7586668 Arabidopsis lyrata
AL3G30910 0.5kb upstream 0.5kb upstream 500   false scaffold_3: 7586169-7586668 Arabidopsis lyrata
AL3G30910 0.5kb downstream 0.5kb downstream 2448   true scaffold_3: 7583721-7586168 Arabidopsis lyrata
AL3G30910 0.5kb downstream 0.5kb downstream 500   false scaffold_3: 7583721-7584220 Arabidopsis lyrata
AL3G30910 1.0kb upstream 1.0kb upstream 2948   true scaffold_3: 7584221-7587168 Arabidopsis lyrata
AL3G30910 1.0kb upstream 1.0kb upstream 1000   false scaffold_3: 7586169-7587168 Arabidopsis lyrata
AL3G30910 1.0kb downstream 1.0kb downstream 2948   true scaffold_3: 7583221-7586168 Arabidopsis lyrata
AL3G30910 1.0kb downstream 1.0kb downstream 1000   false scaffold_3: 7583221-7584220 Arabidopsis lyrata
AL3G30910 2.0kb upstream 2.0kb upstream 3948   true scaffold_3: 7584221-7588168 Arabidopsis lyrata
AL3G30910 2.0kb upstream 2.0kb upstream 2000   false scaffold_3: 7586169-7588168 Arabidopsis lyrata
AL3G30910 2.0kb downstream 2.0kb downstream 3948   true scaffold_3: 7582221-7586168 Arabidopsis lyrata
AL3G30910 2.0kb downstream 2.0kb downstream 2000   false scaffold_3: 7582221-7584220 Arabidopsis lyrata
AL3G30910 5.0kb upstream 5.0kb upstream 6948   true scaffold_3: 7584221-7591168 Arabidopsis lyrata
AL3G30910 5.0kb upstream 5.0kb upstream 5000   false scaffold_3: 7586169-7591168 Arabidopsis lyrata
AL3G30910 5.0kb downstream 5.0kb downstream 6948   true scaffold_3: 7579221-7586168 Arabidopsis lyrata
AL3G30910 5.0kb downstream 5.0kb downstream 5000   false scaffold_3: 7579221-7584220 Arabidopsis lyrata
AL3G30910 10.0kb upstream 10.0kb upstream 11948   true scaffold_3: 7584221-7596168 Arabidopsis lyrata
AL3G30910 10.0kb upstream 10.0kb upstream 10000   false scaffold_3: 7586169-7596168 Arabidopsis lyrata
AL3G30910 10.0kb downstream 10.0kb downstream 11948   true scaffold_3: 7574221-7586168 Arabidopsis lyrata
AL3G30910 10.0kb downstream 10.0kb downstream 10000   false scaffold_3: 7574221-7584220 Arabidopsis lyrata

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122366413 5261 Brassicaceae View MSA
123835201 5264 Brassicales-Malvales View MSA
124346531 5266 SBM View MSA
124244651 5268 Malvidae View MSA
124069705 5270 Rosid View MSA
123740239 5271 Pentapetalae View MSA
122794594 5272 Eudicot View MSA
122050334 5273 Angiosperm View MSA
121350824 5274 Embryophyte View MSA
123427084 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain