Gene : AL3G29920 A. lyrata v2.1
Defline:  (1 of 2) PTHR23335:SF3 - CALMODULIN-BINDING TRANSCRIPTION ACTIVATOR 5-RELATED Genomic Order:  1895
Name:  ? AL3G29920 Secondary Identifier:  ? PAC:35941754
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

3 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AL3G29920 0.5kb upstream 0.5kb upstream 5731   true scaffold_3: 7235923-7241653 Arabidopsis lyrata
AL3G29920 0.5kb upstream 0.5kb upstream 500   false scaffold_3: 7235923-7236422 Arabidopsis lyrata
AL3G29920 0.5kb downstream 0.5kb downstream 5731   true scaffold_3: 7236423-7242153 Arabidopsis lyrata
AL3G29920 0.5kb downstream 0.5kb downstream 500   false scaffold_3: 7241654-7242153 Arabidopsis lyrata
AL3G29920 1.0kb upstream 1.0kb upstream 6231   true scaffold_3: 7235423-7241653 Arabidopsis lyrata
AL3G29920 1.0kb upstream 1.0kb upstream 1000   false scaffold_3: 7235423-7236422 Arabidopsis lyrata
AL3G29920 1.0kb downstream 1.0kb downstream 6231   true scaffold_3: 7236423-7242653 Arabidopsis lyrata
AL3G29920 1.0kb downstream 1.0kb downstream 1000   false scaffold_3: 7241654-7242653 Arabidopsis lyrata
AL3G29920 2.0kb upstream 2.0kb upstream 7231   true scaffold_3: 7234423-7241653 Arabidopsis lyrata
AL3G29920 2.0kb upstream 2.0kb upstream 2000   false scaffold_3: 7234423-7236422 Arabidopsis lyrata
AL3G29920 2.0kb downstream 2.0kb downstream 7231   true scaffold_3: 7236423-7243653 Arabidopsis lyrata
AL3G29920 2.0kb downstream 2.0kb downstream 2000   false scaffold_3: 7241654-7243653 Arabidopsis lyrata
AL3G29920 5.0kb upstream 5.0kb upstream 10231   true scaffold_3: 7231423-7241653 Arabidopsis lyrata
AL3G29920 5.0kb upstream 5.0kb upstream 5000   false scaffold_3: 7231423-7236422 Arabidopsis lyrata
AL3G29920 5.0kb downstream 5.0kb downstream 10231   true scaffold_3: 7236423-7246653 Arabidopsis lyrata
AL3G29920 5.0kb downstream 5.0kb downstream 5000   false scaffold_3: 7241654-7246653 Arabidopsis lyrata
AL3G29920 10.0kb upstream 10.0kb upstream 15231   true scaffold_3: 7226423-7241653 Arabidopsis lyrata
AL3G29920 10.0kb upstream 10.0kb upstream 10000   false scaffold_3: 7226423-7236422 Arabidopsis lyrata
AL3G29920 10.0kb downstream 10.0kb downstream 15231   true scaffold_3: 7236423-7251653 Arabidopsis lyrata
AL3G29920 10.0kb downstream 10.0kb downstream 10000   false scaffold_3: 7241654-7251653 Arabidopsis lyrata

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122360780 5261 Brassicaceae View MSA
123798024 5264 Brassicales-Malvales View MSA
124295712 5266 SBM View MSA
124250326 5268 Malvidae View MSA
124060879 5270 Rosid View MSA
123739187 5271 Pentapetalae View MSA
122787070 5272 Eudicot View MSA
122044952 5273 Angiosperm View MSA
121310369 5274 Embryophyte View MSA
123347871 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain