Gene : AL3G29280 A. lyrata v2.1

Defline:  (1 of 36) PTHR23244:SF208 - F14M2.9 PROTEIN-RELATED Genomic Order:  1834
Name:  ? AL3G29280 Secondary Identifier:  ? PAC:35942509

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AL3G29280 0.5kb upstream 0.5kb upstream 3503   true scaffold_3: 6946672-6950174 Arabidopsis lyrata
AL3G29280 0.5kb upstream 0.5kb upstream 500   false scaffold_3: 6946672-6947171 Arabidopsis lyrata
AL3G29280 0.5kb downstream 0.5kb downstream 3503   true scaffold_3: 6947172-6950674 Arabidopsis lyrata
AL3G29280 0.5kb downstream 0.5kb downstream 500   false scaffold_3: 6950175-6950674 Arabidopsis lyrata
AL3G29280 1.0kb upstream 1.0kb upstream 4003   true scaffold_3: 6946172-6950174 Arabidopsis lyrata
AL3G29280 1.0kb upstream 1.0kb upstream 1000   false scaffold_3: 6946172-6947171 Arabidopsis lyrata
AL3G29280 1.0kb downstream 1.0kb downstream 4003   true scaffold_3: 6947172-6951174 Arabidopsis lyrata
AL3G29280 1.0kb downstream 1.0kb downstream 1000   false scaffold_3: 6950175-6951174 Arabidopsis lyrata
AL3G29280 2.0kb upstream 2.0kb upstream 5003   true scaffold_3: 6945172-6950174 Arabidopsis lyrata
AL3G29280 2.0kb upstream 2.0kb upstream 2000   false scaffold_3: 6945172-6947171 Arabidopsis lyrata
AL3G29280 2.0kb downstream 2.0kb downstream 5003   true scaffold_3: 6947172-6952174 Arabidopsis lyrata
AL3G29280 2.0kb downstream 2.0kb downstream 2000   false scaffold_3: 6950175-6952174 Arabidopsis lyrata
AL3G29280 5.0kb upstream 5.0kb upstream 8003   true scaffold_3: 6942172-6950174 Arabidopsis lyrata
AL3G29280 5.0kb upstream 5.0kb upstream 5000   false scaffold_3: 6942172-6947171 Arabidopsis lyrata
AL3G29280 5.0kb downstream 5.0kb downstream 8003   true scaffold_3: 6947172-6955174 Arabidopsis lyrata
AL3G29280 5.0kb downstream 5.0kb downstream 5000   false scaffold_3: 6950175-6955174 Arabidopsis lyrata
AL3G29280 10.0kb upstream 10.0kb upstream 13003   true scaffold_3: 6937172-6950174 Arabidopsis lyrata
AL3G29280 10.0kb upstream 10.0kb upstream 10000   false scaffold_3: 6937172-6947171 Arabidopsis lyrata
AL3G29280 10.0kb downstream 10.0kb downstream 13003   true scaffold_3: 6947172-6960174 Arabidopsis lyrata
AL3G29280 10.0kb downstream 10.0kb downstream 10000   false scaffold_3: 6950175-6960174 Arabidopsis lyrata

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122360575 5261 Brassicaceae View MSA
123797981 5264 Brassicales-Malvales View MSA
124295672 5266 SBM View MSA
124148048 5268 Malvidae View MSA
124050503 5270 Rosid View MSA
123753130 5271 Pentapetalae View MSA
122797480 5272 Eudicot View MSA
122051624 5273 Angiosperm View MSA
121351046 5274 Embryophyte View MSA
123381988 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain