Gene : AL3G29820 A. lyrata v2.1

Defline:  (1 of 2) PTHR26402:SF617 - TWO-COMPONENT RESPONSE REGULATOR ARR1-RELATED Genomic Order:  1885
Name:  ? AL3G29820 Secondary Identifier:  ? PAC:35944026

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AL3G29820 0.5kb upstream 0.5kb upstream 4215   true scaffold_3: 7197653-7201867 Arabidopsis lyrata
AL3G29820 0.5kb upstream 0.5kb upstream 500   false scaffold_3: 7197653-7198152 Arabidopsis lyrata
AL3G29820 0.5kb downstream 0.5kb downstream 4215   true scaffold_3: 7198153-7202367 Arabidopsis lyrata
AL3G29820 0.5kb downstream 0.5kb downstream 500   false scaffold_3: 7201868-7202367 Arabidopsis lyrata
AL3G29820 1.0kb upstream 1.0kb upstream 4715   true scaffold_3: 7197153-7201867 Arabidopsis lyrata
AL3G29820 1.0kb upstream 1.0kb upstream 1000   false scaffold_3: 7197153-7198152 Arabidopsis lyrata
AL3G29820 1.0kb downstream 1.0kb downstream 4715   true scaffold_3: 7198153-7202867 Arabidopsis lyrata
AL3G29820 1.0kb downstream 1.0kb downstream 1000   false scaffold_3: 7201868-7202867 Arabidopsis lyrata
AL3G29820 2.0kb upstream 2.0kb upstream 5715   true scaffold_3: 7196153-7201867 Arabidopsis lyrata
AL3G29820 2.0kb upstream 2.0kb upstream 2000   false scaffold_3: 7196153-7198152 Arabidopsis lyrata
AL3G29820 2.0kb downstream 2.0kb downstream 5715   true scaffold_3: 7198153-7203867 Arabidopsis lyrata
AL3G29820 2.0kb downstream 2.0kb downstream 2000   false scaffold_3: 7201868-7203867 Arabidopsis lyrata
AL3G29820 5.0kb upstream 5.0kb upstream 8715   true scaffold_3: 7193153-7201867 Arabidopsis lyrata
AL3G29820 5.0kb upstream 5.0kb upstream 5000   false scaffold_3: 7193153-7198152 Arabidopsis lyrata
AL3G29820 5.0kb downstream 5.0kb downstream 8715   true scaffold_3: 7198153-7206867 Arabidopsis lyrata
AL3G29820 5.0kb downstream 5.0kb downstream 5000   false scaffold_3: 7201868-7206867 Arabidopsis lyrata
AL3G29820 10.0kb upstream 10.0kb upstream 13715   true scaffold_3: 7188153-7201867 Arabidopsis lyrata
AL3G29820 10.0kb upstream 10.0kb upstream 10000   false scaffold_3: 7188153-7198152 Arabidopsis lyrata
AL3G29820 10.0kb downstream 10.0kb downstream 13715   true scaffold_3: 7198153-7211867 Arabidopsis lyrata
AL3G29820 10.0kb downstream 10.0kb downstream 10000   false scaffold_3: 7201868-7211867 Arabidopsis lyrata

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122360451 5261 Brassicaceae View MSA
123837338 5264 Brassicales-Malvales View MSA
124344125 5266 SBM View MSA
124241603 5268 Malvidae View MSA
124061733 5270 Rosid View MSA
123739139 5271 Pentapetalae View MSA
122791223 5272 Eudicot View MSA
122048546 5273 Angiosperm View MSA
123428935 5275 Viridiplantae View MSA
121351259 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain