Gene : AL3G33740 A. lyrata v2.1

Defline:  (1 of 1) K06688 - ubiquitin-conjugating enzyme E2 C (UBE2C, UBC11) Genomic Order:  2264
Name:  ? AL3G33740 Secondary Identifier:  ? PAC:35940562

Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Alyrata PWY-7511 Arabidopsis lyrata pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AL3G33740 0.5kb upstream 0.5kb upstream 2220   true scaffold_3: 8771641-8773860 Arabidopsis lyrata
AL3G33740 0.5kb upstream 0.5kb upstream 500   false scaffold_3: 8773361-8773860 Arabidopsis lyrata
AL3G33740 0.5kb downstream 0.5kb downstream 2220   true scaffold_3: 8771141-8773360 Arabidopsis lyrata
AL3G33740 0.5kb downstream 0.5kb downstream 500   false scaffold_3: 8771141-8771640 Arabidopsis lyrata
AL3G33740 1.0kb upstream 1.0kb upstream 2720   true scaffold_3: 8771641-8774360 Arabidopsis lyrata
AL3G33740 1.0kb upstream 1.0kb upstream 1000   false scaffold_3: 8773361-8774360 Arabidopsis lyrata
AL3G33740 1.0kb downstream 1.0kb downstream 2720   true scaffold_3: 8770641-8773360 Arabidopsis lyrata
AL3G33740 1.0kb downstream 1.0kb downstream 1000   false scaffold_3: 8770641-8771640 Arabidopsis lyrata
AL3G33740 2.0kb upstream 2.0kb upstream 3720   true scaffold_3: 8771641-8775360 Arabidopsis lyrata
AL3G33740 2.0kb upstream 2.0kb upstream 2000   false scaffold_3: 8773361-8775360 Arabidopsis lyrata
AL3G33740 2.0kb downstream 2.0kb downstream 3720   true scaffold_3: 8769641-8773360 Arabidopsis lyrata
AL3G33740 2.0kb downstream 2.0kb downstream 2000   false scaffold_3: 8769641-8771640 Arabidopsis lyrata
AL3G33740 5.0kb upstream 5.0kb upstream 6720   true scaffold_3: 8771641-8778360 Arabidopsis lyrata
AL3G33740 5.0kb upstream 5.0kb upstream 5000   false scaffold_3: 8773361-8778360 Arabidopsis lyrata
AL3G33740 5.0kb downstream 5.0kb downstream 6720   true scaffold_3: 8766641-8773360 Arabidopsis lyrata
AL3G33740 5.0kb downstream 5.0kb downstream 5000   false scaffold_3: 8766641-8771640 Arabidopsis lyrata
AL3G33740 10.0kb upstream 10.0kb upstream 11720   true scaffold_3: 8771641-8783360 Arabidopsis lyrata
AL3G33740 10.0kb upstream 10.0kb upstream 10000   false scaffold_3: 8773361-8783360 Arabidopsis lyrata
AL3G33740 10.0kb downstream 10.0kb downstream 11720   true scaffold_3: 8761641-8773360 Arabidopsis lyrata
AL3G33740 10.0kb downstream 10.0kb downstream 10000   false scaffold_3: 8761641-8771640 Arabidopsis lyrata

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122378746 5261 Brassicaceae View MSA
123838520 5264 Brassicales-Malvales View MSA
124340055 5266 SBM View MSA
124250990 5268 Malvidae View MSA
124064944 5270 Rosid View MSA
123741729 5271 Pentapetalae View MSA
122792532 5272 Eudicot View MSA
122046674 5273 Angiosperm View MSA
121349130 5274 Embryophyte View MSA
123424862 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain