Gene : AL3G34050 A. lyrata v2.1

Defline:  (1 of 1) 2.1.3.2 - Aspartate carbamoyltransferase / Carbamylaspartotranskinase Genomic Order:  2294
Name:  ? AL3G34050 Secondary Identifier:  ? PAC:35944398

Sequence Feature Displayer

Ontology Annotation Displayer

3 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Alyrata PWY0-162 Arabidopsis lyrata pathologic  
Alyrata PWY-5686 Arabidopsis lyrata pathologic  
Alyrata PWY-7211 Arabidopsis lyrata pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AL3G34050 0.5kb upstream 0.5kb upstream 3059   true scaffold_3: 8875206-8878264 Arabidopsis lyrata
AL3G34050 0.5kb upstream 0.5kb upstream 500   false scaffold_3: 8877765-8878264 Arabidopsis lyrata
AL3G34050 0.5kb downstream 0.5kb downstream 3059   true scaffold_3: 8874706-8877764 Arabidopsis lyrata
AL3G34050 0.5kb downstream 0.5kb downstream 500   false scaffold_3: 8874706-8875205 Arabidopsis lyrata
AL3G34050 1.0kb upstream 1.0kb upstream 3559   true scaffold_3: 8875206-8878764 Arabidopsis lyrata
AL3G34050 1.0kb upstream 1.0kb upstream 1000   false scaffold_3: 8877765-8878764 Arabidopsis lyrata
AL3G34050 1.0kb downstream 1.0kb downstream 3559   true scaffold_3: 8874206-8877764 Arabidopsis lyrata
AL3G34050 1.0kb downstream 1.0kb downstream 1000   false scaffold_3: 8874206-8875205 Arabidopsis lyrata
AL3G34050 2.0kb upstream 2.0kb upstream 4559   true scaffold_3: 8875206-8879764 Arabidopsis lyrata
AL3G34050 2.0kb upstream 2.0kb upstream 2000   false scaffold_3: 8877765-8879764 Arabidopsis lyrata
AL3G34050 2.0kb downstream 2.0kb downstream 4559   true scaffold_3: 8873206-8877764 Arabidopsis lyrata
AL3G34050 2.0kb downstream 2.0kb downstream 2000   false scaffold_3: 8873206-8875205 Arabidopsis lyrata
AL3G34050 5.0kb upstream 5.0kb upstream 7559   true scaffold_3: 8875206-8882764 Arabidopsis lyrata
AL3G34050 5.0kb upstream 5.0kb upstream 5000   false scaffold_3: 8877765-8882764 Arabidopsis lyrata
AL3G34050 5.0kb downstream 5.0kb downstream 7559   true scaffold_3: 8870206-8877764 Arabidopsis lyrata
AL3G34050 5.0kb downstream 5.0kb downstream 5000   false scaffold_3: 8870206-8875205 Arabidopsis lyrata
AL3G34050 10.0kb upstream 10.0kb upstream 12559   true scaffold_3: 8875206-8887764 Arabidopsis lyrata
AL3G34050 10.0kb upstream 10.0kb upstream 10000   false scaffold_3: 8877765-8887764 Arabidopsis lyrata
AL3G34050 10.0kb downstream 10.0kb downstream 12559   true scaffold_3: 8865206-8877764 Arabidopsis lyrata
AL3G34050 10.0kb downstream 10.0kb downstream 10000   false scaffold_3: 8865206-8875205 Arabidopsis lyrata

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122361849 5261 Brassicaceae View MSA
123834078 5264 Brassicales-Malvales View MSA
124341674 5266 SBM View MSA
124240648 5268 Malvidae View MSA
124063971 5270 Rosid View MSA
123737455 5271 Pentapetalae View MSA
122791226 5272 Eudicot View MSA
122047002 5273 Angiosperm View MSA
121345349 5274 Embryophyte View MSA
123427161 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain