Gene : AL3G33310 A. lyrata v2.1

Defline:  (1 of 3) PTHR11361:SF20 - MUTS PROTEIN HOMOLOG 5 Genomic Order:  2223
Name:  ? AL3G33310 Secondary Identifier:  ? PAC:35943125

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AL3G33310 0.5kb upstream 0.5kb upstream 2275   true scaffold_3: 8578984-8581258 Arabidopsis lyrata
AL3G33310 0.5kb upstream 0.5kb upstream 500   false scaffold_3: 8578984-8579483 Arabidopsis lyrata
AL3G33310 0.5kb downstream 0.5kb downstream 2275   true scaffold_3: 8579484-8581758 Arabidopsis lyrata
AL3G33310 0.5kb downstream 0.5kb downstream 500   false scaffold_3: 8581259-8581758 Arabidopsis lyrata
AL3G33310 1.0kb upstream 1.0kb upstream 2775   true scaffold_3: 8578484-8581258 Arabidopsis lyrata
AL3G33310 1.0kb upstream 1.0kb upstream 1000   false scaffold_3: 8578484-8579483 Arabidopsis lyrata
AL3G33310 1.0kb downstream 1.0kb downstream 2775   true scaffold_3: 8579484-8582258 Arabidopsis lyrata
AL3G33310 1.0kb downstream 1.0kb downstream 1000   false scaffold_3: 8581259-8582258 Arabidopsis lyrata
AL3G33310 2.0kb upstream 2.0kb upstream 3775   true scaffold_3: 8577484-8581258 Arabidopsis lyrata
AL3G33310 2.0kb upstream 2.0kb upstream 2000   false scaffold_3: 8577484-8579483 Arabidopsis lyrata
AL3G33310 2.0kb downstream 2.0kb downstream 3775   true scaffold_3: 8579484-8583258 Arabidopsis lyrata
AL3G33310 2.0kb downstream 2.0kb downstream 2000   false scaffold_3: 8581259-8583258 Arabidopsis lyrata
AL3G33310 5.0kb upstream 5.0kb upstream 6775   true scaffold_3: 8574484-8581258 Arabidopsis lyrata
AL3G33310 5.0kb upstream 5.0kb upstream 5000   false scaffold_3: 8574484-8579483 Arabidopsis lyrata
AL3G33310 5.0kb downstream 5.0kb downstream 6775   true scaffold_3: 8579484-8586258 Arabidopsis lyrata
AL3G33310 5.0kb downstream 5.0kb downstream 5000   false scaffold_3: 8581259-8586258 Arabidopsis lyrata
AL3G33310 10.0kb upstream 10.0kb upstream 11775   true scaffold_3: 8569484-8581258 Arabidopsis lyrata
AL3G33310 10.0kb upstream 10.0kb upstream 10000   false scaffold_3: 8569484-8579483 Arabidopsis lyrata
AL3G33310 10.0kb downstream 10.0kb downstream 11775   true scaffold_3: 8579484-8591258 Arabidopsis lyrata
AL3G33310 10.0kb downstream 10.0kb downstream 10000   false scaffold_3: 8581259-8591258 Arabidopsis lyrata

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121491309 5273 Angiosperm Singleton cluster - no MSA
122325777 5261 Brassicaceae Singleton cluster - no MSA
123767270 5264 Brassicales-Malvales Singleton cluster - no MSA
124265869 5266 SBM Singleton cluster - no MSA
124122295 5268 Malvidae Singleton cluster - no MSA
123851494 5270 Rosid Singleton cluster - no MSA
123437665 5271 Pentapetalae Singleton cluster - no MSA
122473271 5272 Eudicot Singleton cluster - no MSA
120764694 5274 Embryophyte Singleton cluster - no MSA
122807120 5275 Viridiplantae Singleton cluster - no MSA

0 Rna Seq Expressions

0 Strain