Gene : AL3G32880 A. lyrata v2.1

Defline:  (1 of 1) PTHR10996:SF150 - D-3-PHOSPHOGLYCERATE DEHYDROGENASE Genomic Order:  2183
Name:  ? AL3G32880 Secondary Identifier:  ? PAC:35940738

Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Alyrata SER-GLYSYN-PWY Arabidopsis lyrata pathologic  
Alyrata SERSYN-PWY Arabidopsis lyrata pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AL3G32880 0.5kb upstream 0.5kb upstream 2683   true scaffold_3: 8416666-8419348 Arabidopsis lyrata
AL3G32880 0.5kb upstream 0.5kb upstream 500   false scaffold_3: 8416666-8417165 Arabidopsis lyrata
AL3G32880 0.5kb downstream 0.5kb downstream 2683   true scaffold_3: 8417166-8419848 Arabidopsis lyrata
AL3G32880 0.5kb downstream 0.5kb downstream 500   false scaffold_3: 8419349-8419848 Arabidopsis lyrata
AL3G32880 1.0kb upstream 1.0kb upstream 3183   true scaffold_3: 8416166-8419348 Arabidopsis lyrata
AL3G32880 1.0kb upstream 1.0kb upstream 1000   false scaffold_3: 8416166-8417165 Arabidopsis lyrata
AL3G32880 1.0kb downstream 1.0kb downstream 3183   true scaffold_3: 8417166-8420348 Arabidopsis lyrata
AL3G32880 1.0kb downstream 1.0kb downstream 1000   false scaffold_3: 8419349-8420348 Arabidopsis lyrata
AL3G32880 2.0kb upstream 2.0kb upstream 4183   true scaffold_3: 8415166-8419348 Arabidopsis lyrata
AL3G32880 2.0kb upstream 2.0kb upstream 2000   false scaffold_3: 8415166-8417165 Arabidopsis lyrata
AL3G32880 2.0kb downstream 2.0kb downstream 4183   true scaffold_3: 8417166-8421348 Arabidopsis lyrata
AL3G32880 2.0kb downstream 2.0kb downstream 2000   false scaffold_3: 8419349-8421348 Arabidopsis lyrata
AL3G32880 5.0kb upstream 5.0kb upstream 7183   true scaffold_3: 8412166-8419348 Arabidopsis lyrata
AL3G32880 5.0kb upstream 5.0kb upstream 5000   false scaffold_3: 8412166-8417165 Arabidopsis lyrata
AL3G32880 5.0kb downstream 5.0kb downstream 7183   true scaffold_3: 8417166-8424348 Arabidopsis lyrata
AL3G32880 5.0kb downstream 5.0kb downstream 5000   false scaffold_3: 8419349-8424348 Arabidopsis lyrata
AL3G32880 10.0kb upstream 10.0kb upstream 12183   true scaffold_3: 8407166-8419348 Arabidopsis lyrata
AL3G32880 10.0kb upstream 10.0kb upstream 10000   false scaffold_3: 8407166-8417165 Arabidopsis lyrata
AL3G32880 10.0kb downstream 10.0kb downstream 12183   true scaffold_3: 8417166-8429348 Arabidopsis lyrata
AL3G32880 10.0kb downstream 10.0kb downstream 10000   false scaffold_3: 8419349-8429348 Arabidopsis lyrata

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122368613 5261 Brassicaceae View MSA
123799619 5264 Brassicales-Malvales View MSA
124297121 5266 SBM View MSA
124149091 5268 Malvidae View MSA
124071894 5270 Rosid View MSA
123750282 5271 Pentapetalae View MSA
122795023 5272 Eudicot View MSA
122044765 5273 Angiosperm View MSA
121347094 5274 Embryophyte View MSA
123427510 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain