Gene : AL3G31850 A. lyrata v2.1
Defline:  (1 of 1) K08735 - DNA mismatch repair protein MSH2 (MSH2) Genomic Order:  2082
Name:  ? AL3G31850 Secondary Identifier:  ? PAC:35943408
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Expression

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3 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AL3G31850 0.5kb upstream 0.5kb upstream 4933   true scaffold_3: 7951068-7956000 Arabidopsis lyrata
AL3G31850 0.5kb upstream 0.5kb upstream 500   false scaffold_3: 7955501-7956000 Arabidopsis lyrata
AL3G31850 0.5kb downstream 0.5kb downstream 4933   true scaffold_3: 7950568-7955500 Arabidopsis lyrata
AL3G31850 0.5kb downstream 0.5kb downstream 500   false scaffold_3: 7950568-7951067 Arabidopsis lyrata
AL3G31850 1.0kb upstream 1.0kb upstream 5433   true scaffold_3: 7951068-7956500 Arabidopsis lyrata
AL3G31850 1.0kb upstream 1.0kb upstream 1000   false scaffold_3: 7955501-7956500 Arabidopsis lyrata
AL3G31850 1.0kb downstream 1.0kb downstream 5433   true scaffold_3: 7950068-7955500 Arabidopsis lyrata
AL3G31850 1.0kb downstream 1.0kb downstream 1000   false scaffold_3: 7950068-7951067 Arabidopsis lyrata
AL3G31850 2.0kb upstream 2.0kb upstream 6433   true scaffold_3: 7951068-7957500 Arabidopsis lyrata
AL3G31850 2.0kb upstream 2.0kb upstream 2000   false scaffold_3: 7955501-7957500 Arabidopsis lyrata
AL3G31850 2.0kb downstream 2.0kb downstream 6433   true scaffold_3: 7949068-7955500 Arabidopsis lyrata
AL3G31850 2.0kb downstream 2.0kb downstream 2000   false scaffold_3: 7949068-7951067 Arabidopsis lyrata
AL3G31850 5.0kb upstream 5.0kb upstream 9433   true scaffold_3: 7951068-7960500 Arabidopsis lyrata
AL3G31850 5.0kb upstream 5.0kb upstream 5000   false scaffold_3: 7955501-7960500 Arabidopsis lyrata
AL3G31850 5.0kb downstream 5.0kb downstream 9433   true scaffold_3: 7946068-7955500 Arabidopsis lyrata
AL3G31850 5.0kb downstream 5.0kb downstream 5000   false scaffold_3: 7946068-7951067 Arabidopsis lyrata
AL3G31850 10.0kb upstream 10.0kb upstream 14433   true scaffold_3: 7951068-7965500 Arabidopsis lyrata
AL3G31850 10.0kb upstream 10.0kb upstream 10000   false scaffold_3: 7955501-7965500 Arabidopsis lyrata
AL3G31850 10.0kb downstream 10.0kb downstream 14433   true scaffold_3: 7941068-7955500 Arabidopsis lyrata
AL3G31850 10.0kb downstream 10.0kb downstream 10000   false scaffold_3: 7941068-7951067 Arabidopsis lyrata

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122361389 5261 Brassicaceae View MSA
123830207 5264 Brassicales-Malvales View MSA
124338737 5266 SBM View MSA
124239037 5268 Malvidae View MSA
124060647 5270 Rosid View MSA
123740546 5271 Pentapetalae View MSA
122786206 5272 Eudicot View MSA
122042672 5273 Angiosperm View MSA
121343804 5274 Embryophyte View MSA
123423885 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain