Gene : AL3G31840 A. lyrata v2.1

Defline:  (1 of 1) PTHR10625:SF120 - HISTONE DEACETYLASE 15 Genomic Order:  2081
Name:  ? AL3G31840 Secondary Identifier:  ? PAC:35944002

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AL3G31840 0.5kb upstream 0.5kb upstream 4943   true scaffold_3: 7944135-7949077 Arabidopsis lyrata
AL3G31840 0.5kb upstream 0.5kb upstream 500   false scaffold_3: 7944135-7944634 Arabidopsis lyrata
AL3G31840 0.5kb downstream 0.5kb downstream 4943   true scaffold_3: 7944635-7949577 Arabidopsis lyrata
AL3G31840 0.5kb downstream 0.5kb downstream 500   false scaffold_3: 7949078-7949577 Arabidopsis lyrata
AL3G31840 1.0kb upstream 1.0kb upstream 5443   true scaffold_3: 7943635-7949077 Arabidopsis lyrata
AL3G31840 1.0kb upstream 1.0kb upstream 1000   false scaffold_3: 7943635-7944634 Arabidopsis lyrata
AL3G31840 1.0kb downstream 1.0kb downstream 5443   true scaffold_3: 7944635-7950077 Arabidopsis lyrata
AL3G31840 1.0kb downstream 1.0kb downstream 1000   false scaffold_3: 7949078-7950077 Arabidopsis lyrata
AL3G31840 2.0kb upstream 2.0kb upstream 6443   true scaffold_3: 7942635-7949077 Arabidopsis lyrata
AL3G31840 2.0kb upstream 2.0kb upstream 2000   false scaffold_3: 7942635-7944634 Arabidopsis lyrata
AL3G31840 2.0kb downstream 2.0kb downstream 6443   true scaffold_3: 7944635-7951077 Arabidopsis lyrata
AL3G31840 2.0kb downstream 2.0kb downstream 2000   false scaffold_3: 7949078-7951077 Arabidopsis lyrata
AL3G31840 5.0kb upstream 5.0kb upstream 9443   true scaffold_3: 7939635-7949077 Arabidopsis lyrata
AL3G31840 5.0kb upstream 5.0kb upstream 5000   false scaffold_3: 7939635-7944634 Arabidopsis lyrata
AL3G31840 5.0kb downstream 5.0kb downstream 9443   true scaffold_3: 7944635-7954077 Arabidopsis lyrata
AL3G31840 5.0kb downstream 5.0kb downstream 5000   false scaffold_3: 7949078-7954077 Arabidopsis lyrata
AL3G31840 10.0kb upstream 10.0kb upstream 14443   true scaffold_3: 7934635-7949077 Arabidopsis lyrata
AL3G31840 10.0kb upstream 10.0kb upstream 10000   false scaffold_3: 7934635-7944634 Arabidopsis lyrata
AL3G31840 10.0kb downstream 10.0kb downstream 14443   true scaffold_3: 7944635-7959077 Arabidopsis lyrata
AL3G31840 10.0kb downstream 10.0kb downstream 10000   false scaffold_3: 7949078-7959077 Arabidopsis lyrata

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122363743 5261 Brassicaceae View MSA
123828744 5264 Brassicales-Malvales View MSA
124341729 5266 SBM View MSA
124237775 5268 Malvidae View MSA
124065591 5270 Rosid View MSA
123741307 5271 Pentapetalae View MSA
122792610 5272 Eudicot View MSA
122044856 5273 Angiosperm View MSA
121349302 5274 Embryophyte View MSA
123428156 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain