Gene : AL3G35000 A. lyrata v2.1
Defline:  (1 of 2) PTHR34940:SF1 - PHOTOSYSTEM II 5 KDA PROTEIN, CHLOROPLASTIC Genomic Order:  2386
Name:  ? AL3G35000 Secondary Identifier:  ? PAC:35941087
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0 Pathways

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Expression

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3 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AL3G35000 0.5kb upstream 0.5kb upstream 975   true scaffold_3: 9294194-9295168 Arabidopsis lyrata
AL3G35000 0.5kb upstream 0.5kb upstream 500   false scaffold_3: 9294669-9295168 Arabidopsis lyrata
AL3G35000 0.5kb downstream 0.5kb downstream 975   true scaffold_3: 9293694-9294668 Arabidopsis lyrata
AL3G35000 0.5kb downstream 0.5kb downstream 500   false scaffold_3: 9293694-9294193 Arabidopsis lyrata
AL3G35000 1.0kb upstream 1.0kb upstream 1475   true scaffold_3: 9294194-9295668 Arabidopsis lyrata
AL3G35000 1.0kb upstream 1.0kb upstream 1000   false scaffold_3: 9294669-9295668 Arabidopsis lyrata
AL3G35000 1.0kb downstream 1.0kb downstream 1475   true scaffold_3: 9293194-9294668 Arabidopsis lyrata
AL3G35000 1.0kb downstream 1.0kb downstream 1000   false scaffold_3: 9293194-9294193 Arabidopsis lyrata
AL3G35000 2.0kb upstream 2.0kb upstream 2475   true scaffold_3: 9294194-9296668 Arabidopsis lyrata
AL3G35000 2.0kb upstream 2.0kb upstream 2000   false scaffold_3: 9294669-9296668 Arabidopsis lyrata
AL3G35000 2.0kb downstream 2.0kb downstream 2475   true scaffold_3: 9292194-9294668 Arabidopsis lyrata
AL3G35000 2.0kb downstream 2.0kb downstream 2000   false scaffold_3: 9292194-9294193 Arabidopsis lyrata
AL3G35000 5.0kb upstream 5.0kb upstream 5475   true scaffold_3: 9294194-9299668 Arabidopsis lyrata
AL3G35000 5.0kb upstream 5.0kb upstream 5000   false scaffold_3: 9294669-9299668 Arabidopsis lyrata
AL3G35000 5.0kb downstream 5.0kb downstream 5475   true scaffold_3: 9289194-9294668 Arabidopsis lyrata
AL3G35000 5.0kb downstream 5.0kb downstream 5000   false scaffold_3: 9289194-9294193 Arabidopsis lyrata
AL3G35000 10.0kb upstream 10.0kb upstream 10475   true scaffold_3: 9294194-9304668 Arabidopsis lyrata
AL3G35000 10.0kb upstream 10.0kb upstream 10000   false scaffold_3: 9294669-9304668 Arabidopsis lyrata
AL3G35000 10.0kb downstream 10.0kb downstream 10475   true scaffold_3: 9284194-9294668 Arabidopsis lyrata
AL3G35000 10.0kb downstream 10.0kb downstream 10000   false scaffold_3: 9284194-9294193 Arabidopsis lyrata

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122381402 5261 Brassicaceae View MSA
123840325 5264 Brassicales-Malvales View MSA
124349006 5266 SBM View MSA
124249733 5268 Malvidae View MSA
124063108 5270 Rosid View MSA
123738637 5271 Pentapetalae View MSA
122793683 5272 Eudicot View MSA
122046745 5273 Angiosperm View MSA
121349271 5274 Embryophyte View MSA
123427633 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain