Gene : AL3G39150 A. lyrata v2.1

Defline:  (1 of 2) PTHR31499:SF6 - MYB FAMILY TRANSCRIPTION FACTOR-RELATED Genomic Order:  2770
Name:  ? AL3G39150 Secondary Identifier:  ? PAC:35943727

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AL3G39150 0.5kb upstream 0.5kb upstream 3167   true scaffold_3: 11389932-11393098 Arabidopsis lyrata
AL3G39150 0.5kb upstream 0.5kb upstream 500   false scaffold_3: 11389932-11390431 Arabidopsis lyrata
AL3G39150 0.5kb downstream 0.5kb downstream 3167   true scaffold_3: 11390432-11393598 Arabidopsis lyrata
AL3G39150 0.5kb downstream 0.5kb downstream 500   false scaffold_3: 11393099-11393598 Arabidopsis lyrata
AL3G39150 1.0kb upstream 1.0kb upstream 3667   true scaffold_3: 11389432-11393098 Arabidopsis lyrata
AL3G39150 1.0kb upstream 1.0kb upstream 1000   false scaffold_3: 11389432-11390431 Arabidopsis lyrata
AL3G39150 1.0kb downstream 1.0kb downstream 3667   true scaffold_3: 11390432-11394098 Arabidopsis lyrata
AL3G39150 1.0kb downstream 1.0kb downstream 1000   false scaffold_3: 11393099-11394098 Arabidopsis lyrata
AL3G39150 2.0kb upstream 2.0kb upstream 4667   true scaffold_3: 11388432-11393098 Arabidopsis lyrata
AL3G39150 2.0kb upstream 2.0kb upstream 2000   false scaffold_3: 11388432-11390431 Arabidopsis lyrata
AL3G39150 2.0kb downstream 2.0kb downstream 4667   true scaffold_3: 11390432-11395098 Arabidopsis lyrata
AL3G39150 2.0kb downstream 2.0kb downstream 2000   false scaffold_3: 11393099-11395098 Arabidopsis lyrata
AL3G39150 5.0kb upstream 5.0kb upstream 7667   true scaffold_3: 11385432-11393098 Arabidopsis lyrata
AL3G39150 5.0kb upstream 5.0kb upstream 5000   false scaffold_3: 11385432-11390431 Arabidopsis lyrata
AL3G39150 5.0kb downstream 5.0kb downstream 7667   true scaffold_3: 11390432-11398098 Arabidopsis lyrata
AL3G39150 5.0kb downstream 5.0kb downstream 5000   false scaffold_3: 11393099-11398098 Arabidopsis lyrata
AL3G39150 10.0kb upstream 10.0kb upstream 12667   true scaffold_3: 11380432-11393098 Arabidopsis lyrata
AL3G39150 10.0kb upstream 10.0kb upstream 10000   false scaffold_3: 11380432-11390431 Arabidopsis lyrata
AL3G39150 10.0kb downstream 10.0kb downstream 12667   true scaffold_3: 11390432-11403098 Arabidopsis lyrata
AL3G39150 10.0kb downstream 10.0kb downstream 10000   false scaffold_3: 11393099-11403098 Arabidopsis lyrata

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122372145 5261 Brassicaceae View MSA
123838798 5264 Brassicales-Malvales View MSA
124338893 5266 SBM View MSA
124247448 5268 Malvidae View MSA
124064391 5270 Rosid View MSA
123753630 5271 Pentapetalae View MSA
122795386 5272 Eudicot View MSA
122048998 5273 Angiosperm View MSA
123428935 5275 Viridiplantae View MSA
121350891 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain