Gene : AL3G39120 A. lyrata v2.1

Defline:  (1 of 3) PTHR11514:SF61 - TRANSCRIPTION FACTOR FAMA Genomic Order:  2767
Name:  ? AL3G39120 Secondary Identifier:  ? PAC:35942720

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AL3G39120 0.5kb upstream 0.5kb upstream 3118   true scaffold_3: 11354948-11358065 Arabidopsis lyrata
AL3G39120 0.5kb upstream 0.5kb upstream 500   false scaffold_3: 11354948-11355447 Arabidopsis lyrata
AL3G39120 0.5kb downstream 0.5kb downstream 3118   true scaffold_3: 11355448-11358565 Arabidopsis lyrata
AL3G39120 0.5kb downstream 0.5kb downstream 500   false scaffold_3: 11358066-11358565 Arabidopsis lyrata
AL3G39120 1.0kb upstream 1.0kb upstream 3618   true scaffold_3: 11354448-11358065 Arabidopsis lyrata
AL3G39120 1.0kb upstream 1.0kb upstream 1000   false scaffold_3: 11354448-11355447 Arabidopsis lyrata
AL3G39120 1.0kb downstream 1.0kb downstream 3618   true scaffold_3: 11355448-11359065 Arabidopsis lyrata
AL3G39120 1.0kb downstream 1.0kb downstream 1000   false scaffold_3: 11358066-11359065 Arabidopsis lyrata
AL3G39120 2.0kb upstream 2.0kb upstream 4618   true scaffold_3: 11353448-11358065 Arabidopsis lyrata
AL3G39120 2.0kb upstream 2.0kb upstream 2000   false scaffold_3: 11353448-11355447 Arabidopsis lyrata
AL3G39120 2.0kb downstream 2.0kb downstream 4618   true scaffold_3: 11355448-11360065 Arabidopsis lyrata
AL3G39120 2.0kb downstream 2.0kb downstream 2000   false scaffold_3: 11358066-11360065 Arabidopsis lyrata
AL3G39120 5.0kb upstream 5.0kb upstream 7618   true scaffold_3: 11350448-11358065 Arabidopsis lyrata
AL3G39120 5.0kb upstream 5.0kb upstream 5000   false scaffold_3: 11350448-11355447 Arabidopsis lyrata
AL3G39120 5.0kb downstream 5.0kb downstream 7618   true scaffold_3: 11355448-11363065 Arabidopsis lyrata
AL3G39120 5.0kb downstream 5.0kb downstream 5000   false scaffold_3: 11358066-11363065 Arabidopsis lyrata
AL3G39120 10.0kb upstream 10.0kb upstream 12618   true scaffold_3: 11345448-11358065 Arabidopsis lyrata
AL3G39120 10.0kb upstream 10.0kb upstream 10000   false scaffold_3: 11345448-11355447 Arabidopsis lyrata
AL3G39120 10.0kb downstream 10.0kb downstream 12618   true scaffold_3: 11355448-11368065 Arabidopsis lyrata
AL3G39120 10.0kb downstream 10.0kb downstream 10000   false scaffold_3: 11358066-11368065 Arabidopsis lyrata

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122372884 5261 Brassicaceae View MSA
123834888 5264 Brassicales-Malvales View MSA
124336508 5266 SBM View MSA
124242247 5268 Malvidae View MSA
124063220 5270 Rosid View MSA
123749503 5271 Pentapetalae View MSA
122789750 5272 Eudicot View MSA
122051154 5273 Angiosperm View MSA
121350598 5274 Embryophyte View MSA
123428440 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain