Gene : AL3G39530 A. lyrata v2.1
Defline:  (1 of 2) PTHR19306:SF4 - GENOMIC DNA, CHROMOSOME 3, BAC CLONE:F14O13 Genomic Order:  2802
Name:  ? AL3G39530 Secondary Identifier:  ? PAC:35943939
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0 Pathways

Genomics

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Expression

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3 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AL3G39530 0.5kb upstream 0.5kb upstream 6096   true scaffold_3: 11586516-11592611 Arabidopsis lyrata
AL3G39530 0.5kb upstream 0.5kb upstream 500   false scaffold_3: 11586516-11587015 Arabidopsis lyrata
AL3G39530 0.5kb downstream 0.5kb downstream 6096   true scaffold_3: 11587016-11593111 Arabidopsis lyrata
AL3G39530 0.5kb downstream 0.5kb downstream 500   false scaffold_3: 11592612-11593111 Arabidopsis lyrata
AL3G39530 1.0kb upstream 1.0kb upstream 6596   true scaffold_3: 11586016-11592611 Arabidopsis lyrata
AL3G39530 1.0kb upstream 1.0kb upstream 1000   false scaffold_3: 11586016-11587015 Arabidopsis lyrata
AL3G39530 1.0kb downstream 1.0kb downstream 6596   true scaffold_3: 11587016-11593611 Arabidopsis lyrata
AL3G39530 1.0kb downstream 1.0kb downstream 1000   false scaffold_3: 11592612-11593611 Arabidopsis lyrata
AL3G39530 2.0kb upstream 2.0kb upstream 7596   true scaffold_3: 11585016-11592611 Arabidopsis lyrata
AL3G39530 2.0kb upstream 2.0kb upstream 2000   false scaffold_3: 11585016-11587015 Arabidopsis lyrata
AL3G39530 2.0kb downstream 2.0kb downstream 7596   true scaffold_3: 11587016-11594611 Arabidopsis lyrata
AL3G39530 2.0kb downstream 2.0kb downstream 2000   false scaffold_3: 11592612-11594611 Arabidopsis lyrata
AL3G39530 5.0kb upstream 5.0kb upstream 10596   true scaffold_3: 11582016-11592611 Arabidopsis lyrata
AL3G39530 5.0kb upstream 5.0kb upstream 5000   false scaffold_3: 11582016-11587015 Arabidopsis lyrata
AL3G39530 5.0kb downstream 5.0kb downstream 10596   true scaffold_3: 11587016-11597611 Arabidopsis lyrata
AL3G39530 5.0kb downstream 5.0kb downstream 5000   false scaffold_3: 11592612-11597611 Arabidopsis lyrata
AL3G39530 10.0kb upstream 10.0kb upstream 15596   true scaffold_3: 11577016-11592611 Arabidopsis lyrata
AL3G39530 10.0kb upstream 10.0kb upstream 10000   false scaffold_3: 11577016-11587015 Arabidopsis lyrata
AL3G39530 10.0kb downstream 10.0kb downstream 15596   true scaffold_3: 11587016-11602611 Arabidopsis lyrata
AL3G39530 10.0kb downstream 10.0kb downstream 10000   false scaffold_3: 11592612-11602611 Arabidopsis lyrata

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122373970 5261 Brassicaceae View MSA
123835262 5264 Brassicales-Malvales View MSA
124342558 5266 SBM View MSA
124244095 5268 Malvidae View MSA
124066833 5270 Rosid View MSA
123743772 5271 Pentapetalae View MSA
122789162 5272 Eudicot View MSA
122046769 5273 Angiosperm View MSA
121349344 5274 Embryophyte View MSA
123425955 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain