Gene : AL3G38820 A. lyrata v2.1
Defline:  (1 of 260) PF00076 - RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) (RRM_1) Genomic Order:  2740
Name:  ? AL3G38820 Secondary Identifier:  ? PAC:35941892
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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AL3G38820 0.5kb upstream 0.5kb upstream 2155   true scaffold_3: 11151378-11153532 Arabidopsis lyrata
AL3G38820 0.5kb upstream 0.5kb upstream 500   false scaffold_3: 11153033-11153532 Arabidopsis lyrata
AL3G38820 0.5kb downstream 0.5kb downstream 2155   true scaffold_3: 11150878-11153032 Arabidopsis lyrata
AL3G38820 0.5kb downstream 0.5kb downstream 500   false scaffold_3: 11150878-11151377 Arabidopsis lyrata
AL3G38820 1.0kb upstream 1.0kb upstream 2655   true scaffold_3: 11151378-11154032 Arabidopsis lyrata
AL3G38820 1.0kb upstream 1.0kb upstream 1000   false scaffold_3: 11153033-11154032 Arabidopsis lyrata
AL3G38820 1.0kb downstream 1.0kb downstream 2655   true scaffold_3: 11150378-11153032 Arabidopsis lyrata
AL3G38820 1.0kb downstream 1.0kb downstream 1000   false scaffold_3: 11150378-11151377 Arabidopsis lyrata
AL3G38820 2.0kb upstream 2.0kb upstream 3655   true scaffold_3: 11151378-11155032 Arabidopsis lyrata
AL3G38820 2.0kb upstream 2.0kb upstream 2000   false scaffold_3: 11153033-11155032 Arabidopsis lyrata
AL3G38820 2.0kb downstream 2.0kb downstream 3655   true scaffold_3: 11149378-11153032 Arabidopsis lyrata
AL3G38820 2.0kb downstream 2.0kb downstream 2000   false scaffold_3: 11149378-11151377 Arabidopsis lyrata
AL3G38820 5.0kb upstream 5.0kb upstream 6655   true scaffold_3: 11151378-11158032 Arabidopsis lyrata
AL3G38820 5.0kb upstream 5.0kb upstream 5000   false scaffold_3: 11153033-11158032 Arabidopsis lyrata
AL3G38820 5.0kb downstream 5.0kb downstream 6655   true scaffold_3: 11146378-11153032 Arabidopsis lyrata
AL3G38820 5.0kb downstream 5.0kb downstream 5000   false scaffold_3: 11146378-11151377 Arabidopsis lyrata
AL3G38820 10.0kb upstream 10.0kb upstream 11655   true scaffold_3: 11151378-11163032 Arabidopsis lyrata
AL3G38820 10.0kb upstream 10.0kb upstream 10000   false scaffold_3: 11153033-11163032 Arabidopsis lyrata
AL3G38820 10.0kb downstream 10.0kb downstream 11655   true scaffold_3: 11141378-11153032 Arabidopsis lyrata
AL3G38820 10.0kb downstream 10.0kb downstream 10000   false scaffold_3: 11141378-11151377 Arabidopsis lyrata

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122377518 5261 Brassicaceae View MSA
123836416 5264 Brassicales-Malvales View MSA
124344427 5266 SBM View MSA
124249680 5268 Malvidae View MSA
124061793 5270 Rosid View MSA
123747878 5271 Pentapetalae View MSA
122791665 5272 Eudicot View MSA
122044174 5273 Angiosperm View MSA
123429142 5275 Viridiplantae View MSA
121348177 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain