Gene : AL3G38880 A. lyrata v2.1

Defline:  (1 of 6) K03164 - DNA topoisomerase II [EC:5.99.1.3] (TOP2) Genomic Order:  2746
Name:  ? AL3G38880 Secondary Identifier:  ? PAC:35943702

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AL3G38880 0.5kb upstream 0.5kb upstream 6821   true scaffold_3: 11195017-11201837 Arabidopsis lyrata
AL3G38880 0.5kb upstream 0.5kb upstream 500   false scaffold_3: 11195017-11195516 Arabidopsis lyrata
AL3G38880 0.5kb downstream 0.5kb downstream 6821   true scaffold_3: 11195517-11202337 Arabidopsis lyrata
AL3G38880 0.5kb downstream 0.5kb downstream 500   false scaffold_3: 11201838-11202337 Arabidopsis lyrata
AL3G38880 1.0kb upstream 1.0kb upstream 7321   true scaffold_3: 11194517-11201837 Arabidopsis lyrata
AL3G38880 1.0kb upstream 1.0kb upstream 1000   false scaffold_3: 11194517-11195516 Arabidopsis lyrata
AL3G38880 1.0kb downstream 1.0kb downstream 7321   true scaffold_3: 11195517-11202837 Arabidopsis lyrata
AL3G38880 1.0kb downstream 1.0kb downstream 1000   false scaffold_3: 11201838-11202837 Arabidopsis lyrata
AL3G38880 2.0kb upstream 2.0kb upstream 8321   true scaffold_3: 11193517-11201837 Arabidopsis lyrata
AL3G38880 2.0kb upstream 2.0kb upstream 2000   false scaffold_3: 11193517-11195516 Arabidopsis lyrata
AL3G38880 2.0kb downstream 2.0kb downstream 8321   true scaffold_3: 11195517-11203837 Arabidopsis lyrata
AL3G38880 2.0kb downstream 2.0kb downstream 2000   false scaffold_3: 11201838-11203837 Arabidopsis lyrata
AL3G38880 5.0kb upstream 5.0kb upstream 11321   true scaffold_3: 11190517-11201837 Arabidopsis lyrata
AL3G38880 5.0kb upstream 5.0kb upstream 5000   false scaffold_3: 11190517-11195516 Arabidopsis lyrata
AL3G38880 5.0kb downstream 5.0kb downstream 11321   true scaffold_3: 11195517-11206837 Arabidopsis lyrata
AL3G38880 5.0kb downstream 5.0kb downstream 5000   false scaffold_3: 11201838-11206837 Arabidopsis lyrata
AL3G38880 10.0kb upstream 10.0kb upstream 16321   true scaffold_3: 11185517-11201837 Arabidopsis lyrata
AL3G38880 10.0kb upstream 10.0kb upstream 10000   false scaffold_3: 11185517-11195516 Arabidopsis lyrata
AL3G38880 10.0kb downstream 10.0kb downstream 16321   true scaffold_3: 11195517-11211837 Arabidopsis lyrata
AL3G38880 10.0kb downstream 10.0kb downstream 10000   false scaffold_3: 11201838-11211837 Arabidopsis lyrata

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122375375 5261 Brassicaceae View MSA
123832805 5264 Brassicales-Malvales View MSA
124337042 5266 SBM View MSA
124238785 5268 Malvidae View MSA
124064018 5270 Rosid View MSA
123736481 5271 Pentapetalae View MSA
122791740 5272 Eudicot View MSA
122046291 5273 Angiosperm View MSA
121345151 5274 Embryophyte View MSA
123423865 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain