Gene : AL3G38840 A. lyrata v2.1
Defline:  (1 of 2) PTHR12570:SF20 - GENOMIC DNA, CHROMOSOME 3, BAC CLONE:F14O13 Genomic Order:  2742
Name:  ? AL3G38840 Secondary Identifier:  ? PAC:35942704
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0 Pathways

Genomics

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Expression

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3 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AL3G38840 0.5kb upstream 0.5kb upstream 2928   true scaffold_3: 11180947-11183874 Arabidopsis lyrata
AL3G38840 0.5kb upstream 0.5kb upstream 500   false scaffold_3: 11180947-11181446 Arabidopsis lyrata
AL3G38840 0.5kb downstream 0.5kb downstream 2928   true scaffold_3: 11181447-11184374 Arabidopsis lyrata
AL3G38840 0.5kb downstream 0.5kb downstream 500   false scaffold_3: 11183875-11184374 Arabidopsis lyrata
AL3G38840 1.0kb upstream 1.0kb upstream 3428   true scaffold_3: 11180447-11183874 Arabidopsis lyrata
AL3G38840 1.0kb upstream 1.0kb upstream 1000   false scaffold_3: 11180447-11181446 Arabidopsis lyrata
AL3G38840 1.0kb downstream 1.0kb downstream 3428   true scaffold_3: 11181447-11184874 Arabidopsis lyrata
AL3G38840 1.0kb downstream 1.0kb downstream 1000   false scaffold_3: 11183875-11184874 Arabidopsis lyrata
AL3G38840 2.0kb upstream 2.0kb upstream 4428   true scaffold_3: 11179447-11183874 Arabidopsis lyrata
AL3G38840 2.0kb upstream 2.0kb upstream 2000   false scaffold_3: 11179447-11181446 Arabidopsis lyrata
AL3G38840 2.0kb downstream 2.0kb downstream 4428   true scaffold_3: 11181447-11185874 Arabidopsis lyrata
AL3G38840 2.0kb downstream 2.0kb downstream 2000   false scaffold_3: 11183875-11185874 Arabidopsis lyrata
AL3G38840 5.0kb upstream 5.0kb upstream 7428   true scaffold_3: 11176447-11183874 Arabidopsis lyrata
AL3G38840 5.0kb upstream 5.0kb upstream 5000   false scaffold_3: 11176447-11181446 Arabidopsis lyrata
AL3G38840 5.0kb downstream 5.0kb downstream 7428   true scaffold_3: 11181447-11188874 Arabidopsis lyrata
AL3G38840 5.0kb downstream 5.0kb downstream 5000   false scaffold_3: 11183875-11188874 Arabidopsis lyrata
AL3G38840 10.0kb upstream 10.0kb upstream 12428   true scaffold_3: 11171447-11183874 Arabidopsis lyrata
AL3G38840 10.0kb upstream 10.0kb upstream 10000   false scaffold_3: 11171447-11181446 Arabidopsis lyrata
AL3G38840 10.0kb downstream 10.0kb downstream 12428   true scaffold_3: 11181447-11193874 Arabidopsis lyrata
AL3G38840 10.0kb downstream 10.0kb downstream 10000   false scaffold_3: 11183875-11193874 Arabidopsis lyrata

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122376670 5261 Brassicaceae View MSA
123838674 5264 Brassicales-Malvales View MSA
124339897 5266 SBM View MSA
124248760 5268 Malvidae View MSA
124075521 5270 Rosid View MSA
123745073 5271 Pentapetalae View MSA
122789394 5272 Eudicot View MSA
122049852 5273 Angiosperm View MSA
121350958 5274 Embryophyte View MSA
123428746 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain