Gene : AL3G38190 A. lyrata v2.1

Defline:  (1 of 1) K00574 - cyclopropane-fatty-acyl-phospholipid synthase (E2.1.1.79, cfa) Genomic Order:  2683
Name:  ? AL3G38190 Secondary Identifier:  ? PAC:35940445

Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Alyrata PWY-4942 Arabidopsis lyrata pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AL3G38190 0.5kb upstream 0.5kb upstream 6372   true scaffold_3: 10806688-10813059 Arabidopsis lyrata
AL3G38190 0.5kb upstream 0.5kb upstream 500   false scaffold_3: 10806688-10807187 Arabidopsis lyrata
AL3G38190 0.5kb downstream 0.5kb downstream 6372   true scaffold_3: 10807188-10813559 Arabidopsis lyrata
AL3G38190 0.5kb downstream 0.5kb downstream 500   false scaffold_3: 10813060-10813559 Arabidopsis lyrata
AL3G38190 1.0kb upstream 1.0kb upstream 6872   true scaffold_3: 10806188-10813059 Arabidopsis lyrata
AL3G38190 1.0kb upstream 1.0kb upstream 1000   false scaffold_3: 10806188-10807187 Arabidopsis lyrata
AL3G38190 1.0kb downstream 1.0kb downstream 6872   true scaffold_3: 10807188-10814059 Arabidopsis lyrata
AL3G38190 1.0kb downstream 1.0kb downstream 1000   false scaffold_3: 10813060-10814059 Arabidopsis lyrata
AL3G38190 2.0kb upstream 2.0kb upstream 7872   true scaffold_3: 10805188-10813059 Arabidopsis lyrata
AL3G38190 2.0kb upstream 2.0kb upstream 2000   false scaffold_3: 10805188-10807187 Arabidopsis lyrata
AL3G38190 2.0kb downstream 2.0kb downstream 7872   true scaffold_3: 10807188-10815059 Arabidopsis lyrata
AL3G38190 2.0kb downstream 2.0kb downstream 2000   false scaffold_3: 10813060-10815059 Arabidopsis lyrata
AL3G38190 5.0kb upstream 5.0kb upstream 10872   true scaffold_3: 10802188-10813059 Arabidopsis lyrata
AL3G38190 5.0kb upstream 5.0kb upstream 5000   false scaffold_3: 10802188-10807187 Arabidopsis lyrata
AL3G38190 5.0kb downstream 5.0kb downstream 10872   true scaffold_3: 10807188-10818059 Arabidopsis lyrata
AL3G38190 5.0kb downstream 5.0kb downstream 5000   false scaffold_3: 10813060-10818059 Arabidopsis lyrata
AL3G38190 10.0kb upstream 10.0kb upstream 15872   true scaffold_3: 10797188-10813059 Arabidopsis lyrata
AL3G38190 10.0kb upstream 10.0kb upstream 10000   false scaffold_3: 10797188-10807187 Arabidopsis lyrata
AL3G38190 10.0kb downstream 10.0kb downstream 15872   true scaffold_3: 10807188-10823059 Arabidopsis lyrata
AL3G38190 10.0kb downstream 10.0kb downstream 10000   false scaffold_3: 10813060-10823059 Arabidopsis lyrata

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122362173 5261 Brassicaceae View MSA
123828465 5264 Brassicales-Malvales View MSA
124338793 5266 SBM View MSA
124251387 5268 Malvidae View MSA
124060864 5270 Rosid View MSA
123737400 5271 Pentapetalae View MSA
122792723 5272 Eudicot View MSA
122047395 5273 Angiosperm View MSA
121346129 5274 Embryophyte View MSA
123428105 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain