Gene : AL3G37240 A. lyrata v2.1

Defline:  (1 of 6) K13811 - 3'-phosphoadenosine 5'-phosphosulfate synthase (PAPSS) Genomic Order:  2598
Name:  ? AL3G37240 Secondary Identifier:  ? PAC:35942944

Sequence Feature Displayer

Ontology Annotation Displayer

3 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Alyrata PWY-5340 Arabidopsis lyrata pathologic  
Alyrata PWY-6932 Arabidopsis lyrata pathologic  
Alyrata SULFMETII-PWY Arabidopsis lyrata pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AL3G37240 0.5kb upstream 0.5kb upstream 2989   true scaffold_3: 10282947-10285935 Arabidopsis lyrata
AL3G37240 0.5kb upstream 0.5kb upstream 500   false scaffold_3: 10282947-10283446 Arabidopsis lyrata
AL3G37240 0.5kb downstream 0.5kb downstream 2989   true scaffold_3: 10283447-10286435 Arabidopsis lyrata
AL3G37240 0.5kb downstream 0.5kb downstream 500   false scaffold_3: 10285936-10286435 Arabidopsis lyrata
AL3G37240 1.0kb upstream 1.0kb upstream 3489   true scaffold_3: 10282447-10285935 Arabidopsis lyrata
AL3G37240 1.0kb upstream 1.0kb upstream 1000   false scaffold_3: 10282447-10283446 Arabidopsis lyrata
AL3G37240 1.0kb downstream 1.0kb downstream 3489   true scaffold_3: 10283447-10286935 Arabidopsis lyrata
AL3G37240 1.0kb downstream 1.0kb downstream 1000   false scaffold_3: 10285936-10286935 Arabidopsis lyrata
AL3G37240 2.0kb upstream 2.0kb upstream 4489   true scaffold_3: 10281447-10285935 Arabidopsis lyrata
AL3G37240 2.0kb upstream 2.0kb upstream 2000   false scaffold_3: 10281447-10283446 Arabidopsis lyrata
AL3G37240 2.0kb downstream 2.0kb downstream 4489   true scaffold_3: 10283447-10287935 Arabidopsis lyrata
AL3G37240 2.0kb downstream 2.0kb downstream 2000   false scaffold_3: 10285936-10287935 Arabidopsis lyrata
AL3G37240 5.0kb upstream 5.0kb upstream 7489   true scaffold_3: 10278447-10285935 Arabidopsis lyrata
AL3G37240 5.0kb upstream 5.0kb upstream 5000   false scaffold_3: 10278447-10283446 Arabidopsis lyrata
AL3G37240 5.0kb downstream 5.0kb downstream 7489   true scaffold_3: 10283447-10290935 Arabidopsis lyrata
AL3G37240 5.0kb downstream 5.0kb downstream 5000   false scaffold_3: 10285936-10290935 Arabidopsis lyrata
AL3G37240 10.0kb upstream 10.0kb upstream 12489   true scaffold_3: 10273447-10285935 Arabidopsis lyrata
AL3G37240 10.0kb upstream 10.0kb upstream 10000   false scaffold_3: 10273447-10283446 Arabidopsis lyrata
AL3G37240 10.0kb downstream 10.0kb downstream 12489   true scaffold_3: 10283447-10295935 Arabidopsis lyrata
AL3G37240 10.0kb downstream 10.0kb downstream 10000   false scaffold_3: 10285936-10295935 Arabidopsis lyrata

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122363385 5261 Brassicaceae View MSA
123837200 5264 Brassicales-Malvales View MSA
124340173 5266 SBM View MSA
124240625 5268 Malvidae View MSA
124066683 5270 Rosid View MSA
123736470 5271 Pentapetalae View MSA
122791658 5272 Eudicot View MSA
122043781 5273 Angiosperm View MSA
121349339 5274 Embryophyte View MSA
123426585 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain