Gene : AL3G42150 A. lyrata v2.1

Defline:  (1 of 3) K03236 - translation initiation factor 1A (EIF1A) Genomic Order:  3038
Name:  ? AL3G42150 Secondary Identifier:  ? PAC:35940971

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AL3G42150 0.5kb upstream 0.5kb upstream 1628   true scaffold_3: 13428110-13429737 Arabidopsis lyrata
AL3G42150 0.5kb upstream 0.5kb upstream 500   false scaffold_3: 13429238-13429737 Arabidopsis lyrata
AL3G42150 0.5kb downstream 0.5kb downstream 1628   true scaffold_3: 13427610-13429237 Arabidopsis lyrata
AL3G42150 0.5kb downstream 0.5kb downstream 500   false scaffold_3: 13427610-13428109 Arabidopsis lyrata
AL3G42150 1.0kb upstream 1.0kb upstream 2128   true scaffold_3: 13428110-13430237 Arabidopsis lyrata
AL3G42150 1.0kb upstream 1.0kb upstream 1000   false scaffold_3: 13429238-13430237 Arabidopsis lyrata
AL3G42150 1.0kb downstream 1.0kb downstream 2128   true scaffold_3: 13427110-13429237 Arabidopsis lyrata
AL3G42150 1.0kb downstream 1.0kb downstream 1000   false scaffold_3: 13427110-13428109 Arabidopsis lyrata
AL3G42150 2.0kb upstream 2.0kb upstream 3128   true scaffold_3: 13428110-13431237 Arabidopsis lyrata
AL3G42150 2.0kb upstream 2.0kb upstream 2000   false scaffold_3: 13429238-13431237 Arabidopsis lyrata
AL3G42150 2.0kb downstream 2.0kb downstream 3128   true scaffold_3: 13426110-13429237 Arabidopsis lyrata
AL3G42150 2.0kb downstream 2.0kb downstream 2000   false scaffold_3: 13426110-13428109 Arabidopsis lyrata
AL3G42150 5.0kb upstream 5.0kb upstream 6128   true scaffold_3: 13428110-13434237 Arabidopsis lyrata
AL3G42150 5.0kb upstream 5.0kb upstream 5000   false scaffold_3: 13429238-13434237 Arabidopsis lyrata
AL3G42150 5.0kb downstream 5.0kb downstream 6128   true scaffold_3: 13423110-13429237 Arabidopsis lyrata
AL3G42150 5.0kb downstream 5.0kb downstream 5000   false scaffold_3: 13423110-13428109 Arabidopsis lyrata
AL3G42150 10.0kb upstream 10.0kb upstream 11128   true scaffold_3: 13428110-13439237 Arabidopsis lyrata
AL3G42150 10.0kb upstream 10.0kb upstream 10000   false scaffold_3: 13429238-13439237 Arabidopsis lyrata
AL3G42150 10.0kb downstream 10.0kb downstream 11128   true scaffold_3: 13418110-13429237 Arabidopsis lyrata
AL3G42150 10.0kb downstream 10.0kb downstream 10000   false scaffold_3: 13418110-13428109 Arabidopsis lyrata

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122377038 5261 Brassicaceae View MSA
123836382 5264 Brassicales-Malvales View MSA
124341992 5266 SBM View MSA
124243826 5268 Malvidae View MSA
124067350 5270 Rosid View MSA
123749124 5271 Pentapetalae View MSA
122789078 5272 Eudicot View MSA
122047152 5273 Angiosperm View MSA
121349077 5274 Embryophyte View MSA
123428812 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain