Gene : AL3G42370 A. lyrata v2.1

Defline:  (1 of 1) PTHR32077:SF3 - FASCICLIN-LIKE ARABINOGALACTAN PROTEIN 7 Genomic Order:  3058
Name:  ? AL3G42370 Secondary Identifier:  ? PAC:35942583

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AL3G42370 0.5kb upstream 0.5kb upstream 2192   true scaffold_3: 13548012-13550203 Arabidopsis lyrata
AL3G42370 0.5kb upstream 0.5kb upstream 500   false scaffold_3: 13548012-13548511 Arabidopsis lyrata
AL3G42370 0.5kb downstream 0.5kb downstream 2192   true scaffold_3: 13548512-13550703 Arabidopsis lyrata
AL3G42370 0.5kb downstream 0.5kb downstream 500   false scaffold_3: 13550204-13550703 Arabidopsis lyrata
AL3G42370 1.0kb upstream 1.0kb upstream 2692   true scaffold_3: 13547512-13550203 Arabidopsis lyrata
AL3G42370 1.0kb upstream 1.0kb upstream 1000   false scaffold_3: 13547512-13548511 Arabidopsis lyrata
AL3G42370 1.0kb downstream 1.0kb downstream 2692   true scaffold_3: 13548512-13551203 Arabidopsis lyrata
AL3G42370 1.0kb downstream 1.0kb downstream 1000   false scaffold_3: 13550204-13551203 Arabidopsis lyrata
AL3G42370 2.0kb upstream 2.0kb upstream 3692   true scaffold_3: 13546512-13550203 Arabidopsis lyrata
AL3G42370 2.0kb upstream 2.0kb upstream 2000   false scaffold_3: 13546512-13548511 Arabidopsis lyrata
AL3G42370 2.0kb downstream 2.0kb downstream 3692   true scaffold_3: 13548512-13552203 Arabidopsis lyrata
AL3G42370 2.0kb downstream 2.0kb downstream 2000   false scaffold_3: 13550204-13552203 Arabidopsis lyrata
AL3G42370 5.0kb upstream 5.0kb upstream 6692   true scaffold_3: 13543512-13550203 Arabidopsis lyrata
AL3G42370 5.0kb upstream 5.0kb upstream 5000   false scaffold_3: 13543512-13548511 Arabidopsis lyrata
AL3G42370 5.0kb downstream 5.0kb downstream 6692   true scaffold_3: 13548512-13555203 Arabidopsis lyrata
AL3G42370 5.0kb downstream 5.0kb downstream 5000   false scaffold_3: 13550204-13555203 Arabidopsis lyrata
AL3G42370 10.0kb upstream 10.0kb upstream 11692   true scaffold_3: 13538512-13550203 Arabidopsis lyrata
AL3G42370 10.0kb upstream 10.0kb upstream 10000   false scaffold_3: 13538512-13548511 Arabidopsis lyrata
AL3G42370 10.0kb downstream 10.0kb downstream 11692   true scaffold_3: 13548512-13560203 Arabidopsis lyrata
AL3G42370 10.0kb downstream 10.0kb downstream 10000   false scaffold_3: 13550204-13560203 Arabidopsis lyrata

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122374181 5261 Brassicaceae View MSA
123834021 5264 Brassicales-Malvales View MSA
124350835 5266 SBM View MSA
124253587 5268 Malvidae View MSA
124061548 5270 Rosid View MSA
123744352 5271 Pentapetalae View MSA
122795862 5272 Eudicot View MSA
122048693 5273 Angiosperm View MSA
121351509 5274 Embryophyte View MSA
123426561 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain