Gene : AL3G40570 A. lyrata v2.1

Defline:  (1 of 1) PTHR15898:SF1 - GLUCOSE-INDUCED DEGRADATION PROTEIN 4 HOMOLOG Genomic Order:  2897
Name:  ? AL3G40570 Secondary Identifier:  ? PAC:35943612

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AL3G40570 0.5kb upstream 0.5kb upstream 2943   true scaffold_3: 12287025-12289967 Arabidopsis lyrata
AL3G40570 0.5kb upstream 0.5kb upstream 500   false scaffold_3: 12287025-12287524 Arabidopsis lyrata
AL3G40570 0.5kb downstream 0.5kb downstream 2943   true scaffold_3: 12287525-12290467 Arabidopsis lyrata
AL3G40570 0.5kb downstream 0.5kb downstream 500   false scaffold_3: 12289968-12290467 Arabidopsis lyrata
AL3G40570 1.0kb upstream 1.0kb upstream 3443   true scaffold_3: 12286525-12289967 Arabidopsis lyrata
AL3G40570 1.0kb upstream 1.0kb upstream 1000   false scaffold_3: 12286525-12287524 Arabidopsis lyrata
AL3G40570 1.0kb downstream 1.0kb downstream 3443   true scaffold_3: 12287525-12290967 Arabidopsis lyrata
AL3G40570 1.0kb downstream 1.0kb downstream 1000   false scaffold_3: 12289968-12290967 Arabidopsis lyrata
AL3G40570 2.0kb upstream 2.0kb upstream 4443   true scaffold_3: 12285525-12289967 Arabidopsis lyrata
AL3G40570 2.0kb upstream 2.0kb upstream 2000   false scaffold_3: 12285525-12287524 Arabidopsis lyrata
AL3G40570 2.0kb downstream 2.0kb downstream 4443   true scaffold_3: 12287525-12291967 Arabidopsis lyrata
AL3G40570 2.0kb downstream 2.0kb downstream 2000   false scaffold_3: 12289968-12291967 Arabidopsis lyrata
AL3G40570 5.0kb upstream 5.0kb upstream 7443   true scaffold_3: 12282525-12289967 Arabidopsis lyrata
AL3G40570 5.0kb upstream 5.0kb upstream 5000   false scaffold_3: 12282525-12287524 Arabidopsis lyrata
AL3G40570 5.0kb downstream 5.0kb downstream 7443   true scaffold_3: 12287525-12294967 Arabidopsis lyrata
AL3G40570 5.0kb downstream 5.0kb downstream 5000   false scaffold_3: 12289968-12294967 Arabidopsis lyrata
AL3G40570 10.0kb upstream 10.0kb upstream 12443   true scaffold_3: 12277525-12289967 Arabidopsis lyrata
AL3G40570 10.0kb upstream 10.0kb upstream 10000   false scaffold_3: 12277525-12287524 Arabidopsis lyrata
AL3G40570 10.0kb downstream 10.0kb downstream 12443   true scaffold_3: 12287525-12299967 Arabidopsis lyrata
AL3G40570 10.0kb downstream 10.0kb downstream 10000   false scaffold_3: 12289968-12299967 Arabidopsis lyrata

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122376266 5261 Brassicaceae View MSA
123836090 5264 Brassicales-Malvales View MSA
124350084 5266 SBM View MSA
124245890 5268 Malvidae View MSA
124060763 5270 Rosid View MSA
123743131 5271 Pentapetalae View MSA
122792219 5272 Eudicot View MSA
122046771 5273 Angiosperm View MSA
121351616 5274 Embryophyte View MSA
123427773 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain