Gene : AL3G40520 A. lyrata v2.1

Defline:  (1 of 7) PTHR31373:SF0 - EMB Genomic Order:  2893
Name:  ? AL3G40520 Secondary Identifier:  ? PAC:35943551

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AL3G40520 0.5kb upstream 0.5kb upstream 2829   true scaffold_3: 12235848-12238676 Arabidopsis lyrata
AL3G40520 0.5kb upstream 0.5kb upstream 500   false scaffold_3: 12235848-12236347 Arabidopsis lyrata
AL3G40520 0.5kb downstream 0.5kb downstream 2829   true scaffold_3: 12236348-12239176 Arabidopsis lyrata
AL3G40520 0.5kb downstream 0.5kb downstream 500   false scaffold_3: 12238677-12239176 Arabidopsis lyrata
AL3G40520 1.0kb upstream 1.0kb upstream 3329   true scaffold_3: 12235348-12238676 Arabidopsis lyrata
AL3G40520 1.0kb upstream 1.0kb upstream 1000   false scaffold_3: 12235348-12236347 Arabidopsis lyrata
AL3G40520 1.0kb downstream 1.0kb downstream 3329   true scaffold_3: 12236348-12239676 Arabidopsis lyrata
AL3G40520 1.0kb downstream 1.0kb downstream 1000   false scaffold_3: 12238677-12239676 Arabidopsis lyrata
AL3G40520 2.0kb upstream 2.0kb upstream 4329   true scaffold_3: 12234348-12238676 Arabidopsis lyrata
AL3G40520 2.0kb upstream 2.0kb upstream 2000   false scaffold_3: 12234348-12236347 Arabidopsis lyrata
AL3G40520 2.0kb downstream 2.0kb downstream 4329   true scaffold_3: 12236348-12240676 Arabidopsis lyrata
AL3G40520 2.0kb downstream 2.0kb downstream 2000   false scaffold_3: 12238677-12240676 Arabidopsis lyrata
AL3G40520 5.0kb upstream 5.0kb upstream 7329   true scaffold_3: 12231348-12238676 Arabidopsis lyrata
AL3G40520 5.0kb upstream 5.0kb upstream 5000   false scaffold_3: 12231348-12236347 Arabidopsis lyrata
AL3G40520 5.0kb downstream 5.0kb downstream 7329   true scaffold_3: 12236348-12243676 Arabidopsis lyrata
AL3G40520 5.0kb downstream 5.0kb downstream 5000   false scaffold_3: 12238677-12243676 Arabidopsis lyrata
AL3G40520 10.0kb upstream 10.0kb upstream 12329   true scaffold_3: 12226348-12238676 Arabidopsis lyrata
AL3G40520 10.0kb upstream 10.0kb upstream 10000   false scaffold_3: 12226348-12236347 Arabidopsis lyrata
AL3G40520 10.0kb downstream 10.0kb downstream 12329   true scaffold_3: 12236348-12248676 Arabidopsis lyrata
AL3G40520 10.0kb downstream 10.0kb downstream 10000   false scaffold_3: 12238677-12248676 Arabidopsis lyrata

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122041452 5273 Angiosperm View MSA
122325839 5261 Brassicaceae Singleton cluster - no MSA
123767330 5264 Brassicales-Malvales Singleton cluster - no MSA
124265928 5266 SBM Singleton cluster - no MSA
124122352 5268 Malvidae Singleton cluster - no MSA
123851549 5270 Rosid Singleton cluster - no MSA
123749450 5271 Pentapetalae View MSA
122797220 5272 Eudicot View MSA
121346363 5274 Embryophyte View MSA
123428550 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain