Gene : AL3G45230 A. lyrata v2.1

Defline:  (1 of 6) 2.4.1.144 - Beta-1,4-mannosyl-glycoprotein 4-beta-N-acetylglucosaminyltransferase / acetylglucosaminyltransferase III Genomic Order:  3290
Name:  ? AL3G45230 Secondary Identifier:  ? PAC:35942419

Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Alyrata PWY-7426 Arabidopsis lyrata pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AL3G45230 0.5kb upstream 0.5kb upstream 2156   true scaffold_3: 18085510-18087665 Arabidopsis lyrata
AL3G45230 0.5kb upstream 0.5kb upstream 500   false scaffold_3: 18085510-18086009 Arabidopsis lyrata
AL3G45230 0.5kb downstream 0.5kb downstream 2156   true scaffold_3: 18086010-18088165 Arabidopsis lyrata
AL3G45230 0.5kb downstream 0.5kb downstream 500   false scaffold_3: 18087666-18088165 Arabidopsis lyrata
AL3G45230 1.0kb upstream 1.0kb upstream 2656   true scaffold_3: 18085010-18087665 Arabidopsis lyrata
AL3G45230 1.0kb upstream 1.0kb upstream 1000   false scaffold_3: 18085010-18086009 Arabidopsis lyrata
AL3G45230 1.0kb downstream 1.0kb downstream 2656   true scaffold_3: 18086010-18088665 Arabidopsis lyrata
AL3G45230 1.0kb downstream 1.0kb downstream 1000   false scaffold_3: 18087666-18088665 Arabidopsis lyrata
AL3G45230 2.0kb upstream 2.0kb upstream 3656   true scaffold_3: 18084010-18087665 Arabidopsis lyrata
AL3G45230 2.0kb upstream 2.0kb upstream 2000   false scaffold_3: 18084010-18086009 Arabidopsis lyrata
AL3G45230 2.0kb downstream 2.0kb downstream 3656   true scaffold_3: 18086010-18089665 Arabidopsis lyrata
AL3G45230 2.0kb downstream 2.0kb downstream 2000   false scaffold_3: 18087666-18089665 Arabidopsis lyrata
AL3G45230 5.0kb upstream 5.0kb upstream 6656   true scaffold_3: 18081010-18087665 Arabidopsis lyrata
AL3G45230 5.0kb upstream 5.0kb upstream 5000   false scaffold_3: 18081010-18086009 Arabidopsis lyrata
AL3G45230 5.0kb downstream 5.0kb downstream 6656   true scaffold_3: 18086010-18092665 Arabidopsis lyrata
AL3G45230 5.0kb downstream 5.0kb downstream 5000   false scaffold_3: 18087666-18092665 Arabidopsis lyrata
AL3G45230 10.0kb upstream 10.0kb upstream 11656   true scaffold_3: 18076010-18087665 Arabidopsis lyrata
AL3G45230 10.0kb upstream 10.0kb upstream 10000   false scaffold_3: 18076010-18086009 Arabidopsis lyrata
AL3G45230 10.0kb downstream 10.0kb downstream 11656   true scaffold_3: 18086010-18097665 Arabidopsis lyrata
AL3G45230 10.0kb downstream 10.0kb downstream 10000   false scaffold_3: 18087666-18097665 Arabidopsis lyrata

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122367745 5261 Brassicaceae View MSA
123832008 5264 Brassicales-Malvales View MSA
124341875 5266 SBM View MSA
124239876 5268 Malvidae View MSA
124067293 5270 Rosid View MSA
123743296 5271 Pentapetalae View MSA
122789853 5272 Eudicot View MSA
122046234 5273 Angiosperm View MSA
121351107 5274 Embryophyte View MSA
123424609 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain